RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LKAAEAR1Q8TD35 194 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TM9SF4Q92544 642 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RAD51AP1Q96B01 352 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 PANX3Q96QZ0 392 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RAB11FIP5Q9BXF6 653 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 P2RY12Q9H244 342 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 EIF2B3Q9NR50 452 aaKnown RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TREX1Q9NSU2 369 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 ASF1BQ9NVP2 202 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 PAK5Q9P286 719 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 ANAPC5Q9UJX4 755 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TTC7AQ9ULT0 858 aaPredicted RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 KLHL20Q9Y2M5 609 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 MRFAP1Q9Y605 127 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 DOCK10Q96BY6 2186 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 PCM1Q15154 2024 aa9.96□□□□□ -0.81
VPS4B-207ENST00000591519 VSTM2BA6NLU5 285 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 AP3B1O00203 1094 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 DSCR3O14972 297 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CD3EAPO15446 510 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 C1orf105O95561 183 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 APRTP07741 180 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 RNF224P0DH78 156 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 GRIA3P42263 894 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CSE1LP55060 971 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 SF1Q15637 639 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CYP2A13Q16696 494 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 TTC23LQ6PF05 361 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 LDB1Q86U70 411 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 KRT222Q8N1A0 295 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 INPP5DQ92835 1189 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 NAPGQ99747 312 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 IL22Q9GZX6 179 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 MRM3Q9HC36 420 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 ZBTB20Q9HC78 741 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 HOMER3Q9NSC5 361 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CUTCQ9NTM9 273 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CATSPERZQ9NTU4 200 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 MARCH4Q9P2E8 410 aaPredicted RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.82
VPS4B-207ENST00000591519 SLC39A10Q9ULF5 831 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 ZKSCAN5Q9Y2L8 839 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 HS3ST3B1Q9Y662 390 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 POLEQ07864 2286 aa9.96□□□□□ -0.82
VPS4B-207ENST00000591519 MDC1Q14676 2089 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 GOLGA6L10A0A0M3HER8 536 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CTAGE9A4FU28 777 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 SOCS6O14544 535 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CTSVO60911 334 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 MATN4O95460 622 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 LDLRP01130 860 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 KRT14P02533 472 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 TCP1P17987 556 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 COILP38432 576 aaPredicted RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CCNFP41002 786 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 ADARP55265 1226 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 FOXL2P58012 376 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 GBX1Q14549 363 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 SLC9A5Q14940 896 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 TMED2Q15363 201 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 PRAMEF13Q5VWM6 474 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 ARMC3Q5W041 872 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 HIST2H2BCQ6DN03 193 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 PTRHD1Q6GMV3 140 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CCDC137Q6PK04 289 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 KIRREL2Q6UWL6 708 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 COX15Q7KZN9 410 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 OTOAQ7RTW8 1153 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 C2orf73Q8N5S3 287 aaPredicted RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 OR2A1Q8NGT9 310 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 ACTRT1Q8TDG2 376 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 PPP4R1Q8TF05 950 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 BIRC8Q96P09 236 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 IL17FQ96PD4 163 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 TCF12Q99081 682 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 NAP1L3Q99457 506 aaPredicted RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 KIFC1Q9BW19 673 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 SLC6A20Q9NP91 592 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 SEMA3GQ9NS98 782 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 IRAK4Q9NWZ3 460 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 BFARQ9NZS9 450 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 GNPTGQ9UJJ9 305 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 COPG1Q9Y678 874 aaKnown RBP9.95□□□□□ -0.82
VPS4B-207ENST00000591519 CNTRLQ7Z7A1 2325 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 NOTCH2Q04721 2471 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 TEX15Q9BXT5 2789 aa9.95□□□□□ -0.82
VPS4B-207ENST00000591519 DOPEY1Q5JWR5 2465 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 NUP210LQ5VU65 1888 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 LOC100996750A0A140TA64 210 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 A0A1W2PPV9 198 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 HYKKA2RU49 373 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 MASP2O00187 686 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms