RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 CCNCP24863 283 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 CHRNA4P43681 627 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 EPHA5P54756 1037 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ERVK-21P61565 698 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RRAS2P62070 204 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 POLR2GP62487 172 aaKnown RBP eCLIP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 PSPHP78330 225 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 NFE2L1Q14494 772 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ZNF273Q14593 569 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 LARS2Q15031 903 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.52□□□□□ -1.212e-8■□□□□ 9.3
NEDD4L-229ENST00000590506 FAM72AQ5TYM5 149 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FAM72DQ6L9T8 149 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 CCDC149Q6ZUS6 474 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FAM72BQ86X60 149 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RNF130Q86XS8 419 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 PHACTR4Q8IZ21 702 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 STX19Q8N4C7 294 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 AADATQ8N5Z0 425 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 OR8K5Q8NH50 307 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RBPMSQ93062 196 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 SENP8Q96LD8 212 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 C12orf42Q96LP6 360 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 OR5M11Q96RB7 305 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 TMEM209Q96SK2 561 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 TBL1YQ9BQ87 522 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FICDQ9BVA6 458 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ATXN3LQ9H3M9 355 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ASB7Q9H672 318 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 DCAF13Q9NV06 445 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ZIM2Q9NZV7 527 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 USP21Q9UK80 565 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 MGAT4AQ9UM21 535 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 CMAHPQ9Y471 501 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ACTL7AQ9Y615 435 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 DCLK1O15075 740 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 MUSKO15146 869 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 TRIM3O75382 744 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 SCELO95171 688 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RAF1P04049 648 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ERCC2P18074 760 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 CLCNKAP51800 687 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 GBX2P52951 348 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 BAMBIQ13145 260 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RPA4Q13156 261 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 DGKZQ13574 1117 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 EXOSC2Q13868 293 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FGFBP1Q14512 234 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 MED22Q15528 200 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 OR4D1Q15615 310 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 GRK1Q15835 563 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 WSCD2Q2TBF2 565 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 SUPT20HL1Q3ZLR7 823 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 GPR153Q6NV75 609 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 GCNT7Q6ZNI0 430 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ADGRG3Q86Y34 549 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 DNAJC22Q8N4W6 341 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 NPWQ8N729 165 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 DCBLD1Q8N8Z6 715 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 GDPD1Q8N9F7 314 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 SLC37A3Q8NCC5 494 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 OR6C4Q8NGE1 309 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 KLHL6Q8WZ60 621 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 PHF21AQ96BD5 680 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 TEKT5Q96M29 485 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FOPNLQ96NB1 174 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 KCNC2Q96PR1 638 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 MRPL45Q9BRJ2 306 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 NT5C1AQ9BXI3 368 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ABCB9Q9NP78 766 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 PAK6Q9NQU5 681 aaPredicted RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 ZNF302Q9NR11 478 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 OLA1Q9NTK5 396 aaKnown RBP7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 SIRT5Q9NXA8 310 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 IL20Q9NYY1 176 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 NLKQ9UBE8 527 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FAM8A1Q9UBU6 413 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 PCDHGA6Q9Y5G7 932 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 KLK4Q9Y5K2 254 aa7.52□□□□□ -1.21
NEDD4L-229ENST00000590506 FABP12A6NFH5 140 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 ZNF682O95780 498 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 RPL35P42766 123 aaKnown RBP7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 MAP2K3P46734 347 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 NPRL3Q12980 569 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 CDH18Q13634 790 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 DOC2BQ14184 412 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 GTDC1Q4AE62 458 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 FBXO43Q4G163 708 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 NOMO2Q5JPE7 1267 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 EEF1DP3Q658K8 133 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 BBS7Q8IWZ6 715 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 DEFB106AQ8N104 65 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 C7orf31Q8N865 590 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 SLC35F5Q8WV83 523 aa7.51□□□□□ -1.21
NEDD4L-229ENST00000590506 AP2M1Q96CW1 435 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms