RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TMPRSS11BQ86T26 416 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZNF548Q8NEK5 533 aaPredicted RBP16.85■□□□□ 0.29
CXXC1-212ENST00000589940 SLC37A2Q8TED4 501 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZDHHC1Q8WTX9 485 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 LCN9Q8WX39 176 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 USP7Q93009 1102 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 WDR34Q96EX3 536 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 AKTIPQ9H8T0 292 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 ZSCAN32Q9NX65 697 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 TAC3Q9UHF0 121 aa16.85■□□□□ 0.29
CXXC1-212ENST00000589940 FAM91A1Q658Y4 838 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 ATG9BQ674R7 924 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 YTHDF3Q7Z739 585 aaKnown RBP16.84■□□□□ 0.29
CXXC1-212ENST00000589940 AMIGO1Q86WK6 493 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 SDR16C5Q8N3Y7 309 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 TUBGCP3Q96CW5 907 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 PTCD3Q96EY7 689 aaKnown RBP16.84■□□□□ 0.29
CXXC1-212ENST00000589940 ACAT2Q9BWD1 397 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 ELOVL6Q9H5J4 265 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 RIC8BQ9NVN3 520 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 ARMCX1Q9P291 453 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 AQP9O43315 295 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 UBOX5O94941 541 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 CTSKP43235 329 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 KIF19Q2TAC6 998 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 CATSPEREQ5SY80 951 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 TMEM198Q66K66 360 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 NXPE4Q6UWF7 544 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 C17orf64Q86WR6 236 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 HBEGFQ99075 208 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 EFCAB11Q9BUY7 163 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 FARSBQ9NSD9 589 aaKnown RBP16.84■□□□□ 0.29
CXXC1-212ENST00000589940 ZNF490Q9ULM2 529 aaPredicted RBP16.84■□□□□ 0.29
CXXC1-212ENST00000589940 DOLKQ9UPQ8 538 aa16.84■□□□□ 0.29
CXXC1-212ENST00000589940 B4DGG1 531 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 H0YIV9 168 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 YY2O15391 372 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 C1GALT1C1LP0DN25 315 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 VARSP26640 1264 aaKnown RBP16.83■□□□□ 0.28
CXXC1-212ENST00000589940 UBAP2LQ14157 1087 aaKnown RBP16.83■□□□□ 0.28
CXXC1-212ENST00000589940 GPR18Q14330 331 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 GALNTL6Q49A17 601 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 FRG2Q64ET8 278 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 CHSY3Q70JA7 882 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 TRIM46Q7Z4K8 759 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 SFTPA2Q8IWL1 248 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 OR4E2Q8NGC2 313 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 OR2T11Q8NH01 316 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 FRG2BQ96QU4 278 aa16.83■□□□□ 0.28
CXXC1-212ENST00000589940 TDRD6O60522 2096 aaKnown RBP16.83■□□□□ 0.28
CXXC1-212ENST00000589940 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PIAS2O75928 621 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 KIAA0754O94854 1291 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PRR35P0CG20 571 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SP9P0CG40 484 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 CDH1P12830 882 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PSMB5P28074 263 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PLCL1Q15111 1095 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PAGE2BQ5JRK9 111 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-212ENST00000589940 Q6ZSR9 355 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SLC9B2Q86UD5 537 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SYT12Q8IV01 421 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 ZBTB44Q8NCP5 570 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 JPH3Q8WXH2 748 aaPredicted RBP16.82■□□□□ 0.28
CXXC1-212ENST00000589940 CCDC106Q9BWC9 280 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SRMSQ9H3Y6 488 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PCDHB11Q9Y5F2 797 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 TNRC6BQ9UPQ9 1833 aaKnown RBP16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SLC28A1O00337 649 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 UBDO15205 165 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PDYNP01213 254 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 LBPP18428 481 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 ZNF33BQ06732 778 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 ANGPT1Q15389 498 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 SGO1Q5FBB7 561 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 ICE2Q659A1 982 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 RBM12BQ8IXT5 1001 aaKnown RBP16.82■□□□□ 0.28
CXXC1-212ENST00000589940 OR2A1Q8NGT9 310 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PIGKQ92643 395 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 CATSPER2Q96P56 530 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 ZNF385DQ9H6B1 395 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 GEMIN8Q9NWZ8 242 aaKnown RBP16.82■□□□□ 0.28
CXXC1-212ENST00000589940 GIMAP2Q9UG22 337 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 PCDHGA11Q9Y5H2 935 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 CACNA1EQ15878 2313 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 VPS13AQ96RL7 3174 aa16.82■□□□□ 0.28
CXXC1-212ENST00000589940 CAPN14A8MX76 684 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 RGS14O43566 566 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 PRICKLE3O43900 615 aaPredicted RBP16.81■□□□□ 0.28
CXXC1-212ENST00000589940 SDC3O75056 442 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 PEX11AO75192 247 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 BNC1Q01954 994 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 LAPTM5Q13571 262 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
CXXC1-212ENST00000589940 OGFOD2Q6N063 350 aa16.81■□□□□ 0.28
CXXC1-212ENST00000589940 AVL9Q8NBF6 648 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms