RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	CDC14C	A4D256	554 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	C21orf140	B9A014	251 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	EIF3F	O00303	357 aa	Predicted RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	CREG1	O75629	220 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZNF37A	P17032	561 aa	Predicted RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	PTPN4	P29074	926 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	POLE2	P56282	527 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	TAS2R39	P59534	338 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ARHGAP19	Q14CB8	494 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	NCF4	Q15080	339 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	WHAMMP3	Q1A5X7	153 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	DEFB109B	Q30KR1	87 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ICE2	Q659A1	982 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	FAM45BP	Q6NSW5	357 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	RHBDD2	Q6NTF9	364 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	PAQR7	Q86WK9	346 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	MCAT	Q8IVS2	390 aa	Known RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	CEP97	Q8IW35	865 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	GPR135	Q8IZ08	494 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	OR4N4	Q8N0Y3	316 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	MYO1H	Q8N1T3	1032 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZNF843	Q8N446	348 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	METTL27	Q8N6F8	245 aa	Predicted RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	BBOF1	Q8ND07	529 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	FAM45A	Q8TCE6	357 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	MAGEC3	Q8TD91	643 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	PYROXD1	Q8WU10	500 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	SMPDL3A	Q92484	453 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	N4BP2L2	Q92802	583 aa	Predicted RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	SLC22A18	Q96BI1	424 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	VPS39	Q96JC1	886 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZNF285	Q96NJ3	590 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	DPH7	Q9BTV6	452 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	RAB17	Q9H0T7	212 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZDHHC18	Q9NUE0	388 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	IRAK4	Q9NWZ3	460 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	SERTAD3	Q9UJW9	196 aa		9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	UTP11	Q9Y3A2	253 aa	Known RBP	9.46	□□□□□ -0.9
PTPN2-208	ENST00000589216	MYO18B	Q8IUG5	2567 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216		A0A0J9YVX5	310 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	NPEPPSL1	A6NEC2	478 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	FAM159B	A6NKW6	160 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	HAT1	O14929	419 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	EIF3H	O15372	352 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	P2RX6	O15547	441 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	MAP3K7	O43318	606 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	FAM155B	O75949	473 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	DNAJB5	O75953	348 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	WISP3	O95389	354 aa	Predicted RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	STATH	P02808	62 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SAT1	P21673	171 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	RPA3	P35244	121 aa	Predicted RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	RGS4	P49798	205 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	VSX2	P58304	361 aa	Predicted RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	CHAF1B	Q13112	559 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SP140	Q13342	867 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	PDAP1	Q13442	181 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	PPP1R3A	Q16821	1122 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	CRTC2	Q53ET0	693 aa	Predicted RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZNF425	Q6IV72	752 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	BORA	Q6PGQ7	559 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SBSN	Q6UWP8	590 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	COX15	Q7KZN9	410 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SLC26A11	Q86WA9	606 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	PLD3	Q8IV08	490 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	RAB42	Q8N4Z0	105 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	LSM14A	Q8ND56	463 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	ADAMTS17	Q8TE56	1095 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	ANKRD49	Q8WVL7	239 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SEC14L1	Q92503	715 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	MED8	Q96G25	268 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	WBP1	Q96G27	269 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	MS4A3	Q96HJ5	214 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	C10orf90	Q96M02	699 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SELENOS	Q9BQE4	189 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	EFHD1	Q9BUP0	239 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	TRIM55	Q9BYV6	548 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	UNK	Q9C0B0	810 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	RHOJ	Q9H4E5	214 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	MRPS30	Q9NP92	439 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	INTS7	Q9NVH2	962 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	DMGDH	Q9UI17	866 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	KCND3	Q9UK17	655 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	TCFL5	Q9UL49	500 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	CORO1C	Q9ULV4	474 aa	Predicted RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	MTO1	Q9Y2Z2	717 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	KCNMB2	Q9Y691	235 aa		9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	SPEN	Q96T58	3664 aa	Known RBP	9.45	□□□□□ -0.9
PTPN2-208	ENST00000589216	TARM1	B6A8C7	271 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216		K7EM74	188 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	TK2	O00142	265 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	CDC7	O00311	574 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	NDC80	O14777	642 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	PHGDH	O43175	533 aa	Known RBP	9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	ZBTB14	O43829	449 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	KLF7	O75840	302 aa	Predicted RBP	9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	FKBP9	O95302	570 aa		9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	KLK3	P07288	261 aa	Predicted RBP	9.44	□□□□□ -0.9
PTPN2-208	ENST00000589216	C8G	P07360	202 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms