RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RBM15BQ8NDT2 890 aaKnown RBP11.03□□□□□ -0.64
SMAD4-205ENST00000588745 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 OR2L8Q8NGY9 312 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 WDR20Q8TBZ3 569 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 GPBAR1Q8TDU6 330 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 HSPA12BQ96MM6 686 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 NRTNQ99748 197 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 C1orf50Q9BV19 199 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 TBC1D10AQ9BXI6 508 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 BRINP2Q9C0B6 783 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 PCBD2Q9H0N5 130 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 C1orf21Q9H246 121 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 TCEAL2Q9H3H9 227 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-205ENST00000588745 KIR3DX1Q9H7L2 352 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 SDR39U1Q9NRG7 319 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-205ENST00000588745 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 TAC3Q9UHF0 121 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 POLR3HQ9Y535 204 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-205ENST00000588745 GPR45Q9Y5Y3 372 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 COLEC10Q9Y6Z7 277 aa11.03□□□□□ -0.64
SMAD4-205ENST00000588745 FANCMQ8IYD8 2048 aa11.02□□□□□ -0.64
SMAD4-205ENST00000588745 A0A1W2PPV9 198 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 NPIPB8E9PQR5 432 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 H0YHG0 523 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 GYG2O15488 501 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 WNT1P04628 370 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 C1GALT1C1LP0DN25 315 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 BCKDHBP21953 392 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 CD38P28907 300 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 BLKP51451 505 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 DMWDQ09019 674 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 GRIK2Q13002 908 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 MAD2L1Q13257 205 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 LAPTM5Q13571 262 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 CUL3Q13618 768 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 SLBPQ14493 270 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 AP5B1Q2VPB7 878 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 PDCD4Q53EL6 469 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 AGKQ53H12 422 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 PAOXQ6QHF9 649 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 NXPE4Q6UWF7 544 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 C17orf64Q86WR6 236 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 ZFAND4Q86XD8 727 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 C2orf73Q8N5S3 287 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 LINC01555Q8NAE3 123 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 OR9I1Q8NGQ6 314 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 FBXO27Q8NI29 283 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 UTP4Q969X6 686 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 REPS1Q96D71 796 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 MTFMTQ96DP5 389 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 RAB3IPQ96QF0 476 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 CADM1Q9BY67 442 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 PELI2Q9HAT8 420 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 LRTM1Q9HBL6 345 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 SPATA6Q9NWH7 488 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 GEMIN8Q9NWZ8 242 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 ASIC5Q9NY37 505 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 NOP53Q9NZM5 478 aaKnown RBP11.02□□□□□ -0.65
SMAD4-205ENST00000588745 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 ICKQ9UPZ9 632 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 PCDHGA11Q9Y5H2 935 aa11.02□□□□□ -0.65
SMAD4-205ENST00000588745 CEP192Q8TEP8 1941 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 PRAMEF33A0A0G2JMD5 474 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 PIPSLA2A3N6 862 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 MAP3K13O43283 966 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 KRT16P08779 473 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 CDH1P12830 882 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 HSD3B1P14060 373 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 SLC2A4P14672 509 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 HSD3B2P26439 372 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 HOXA6P31267 233 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 CPOXP36551 454 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 NEK2P51955 445 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 NME5P56597 212 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 RPS6KA2Q15349 733 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 RFTN2Q52LD8 501 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 ZNF542PQ5EBM4 170 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 C10orf62Q5T681 223 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 MED27Q6P2C8 311 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 LAYNQ6UX15 382 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 LAS2Q8IYD9 372 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 OR7G3Q8NG95 312 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 SH3KBP1Q96B97 665 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 RCN3Q96D15 328 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 CXorf40BQ96DE9 158 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 SLC25A23Q9BV35 468 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 ACAT2Q9BWD1 397 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 XKR8Q9H6D3 395 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 BRF2Q9HAW0 419 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 TM9SF3Q9HD45 589 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 PRMT8Q9NR22 394 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-205ENST00000588745 TMEM45AQ9NWC5 275 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 C1orf109Q9NX04 203 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 ZIM2Q9NZV7 527 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 CCDC167Q9P0B6 97 aa11.01□□□□□ -0.65
SMAD4-205ENST00000588745 TAAR2Q9P1P5 351 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms