RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RELTQ969Z4 430 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 TREX1Q9NSU2 369 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 ZNF282Q9UDV7 671 aaPredicted RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 C3orf18Q9UK00 162 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 AMFRQ9UKV5 643 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 MRPS2Q9Y399 296 aaKnown RBP17.56■□□□□ 0.4
CCDC43-204ENST00000588687 FAM169AQ9Y6X4 670 aa17.56■□□□□ 0.4
CCDC43-204ENST00000588687 F8P00451 2351 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 POLQO75417 2590 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 A0A0J9YVX5 310 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 MIF4GDA9UHW6 222 aaKnown RBP17.55■□□□□ 0.4
CCDC43-204ENST00000588687 MAP2K7O14733 419 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 LIASO43766 372 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 JRKO75564 520 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 FTCDO95954 541 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 PRR35P0CG20 571 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 ERGP11308 486 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 FDFT1P37268 417 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 TNFSF10P50591 281 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 KCNK10P57789 538 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 TMED2Q15363 201 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 INAQ16352 499 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 VWA2Q5GFL6 755 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 AARS2Q5JTZ9 985 aaKnown RBP17.55■□□□□ 0.4
CCDC43-204ENST00000588687 MYO7BQ6PIF6 2116 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 PRUNE1Q86TP1 453 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 BRIX1Q8TDN6 353 aaKnown RBP17.55■□□□□ 0.4
CCDC43-204ENST00000588687 NR4A3Q92570 626 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 RAD51AP1Q96B01 352 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 MIEF2Q96C03 454 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 HES6Q96HZ4 224 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 CATSPERZQ9NTU4 200 aa17.55■□□□□ 0.4
CCDC43-204ENST00000588687 IGKV1-8A0A0C4DH67 115 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 A0A1B0GUH1 482 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 USP1O94782 785 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 CELA2AP08217 269 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 RPS3P23396 243 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC43-204ENST00000588687 ARNTP27540 789 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 PRAMEP78395 509 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 FASTKQ14296 549 aaKnown RBP17.54■□□□□ 0.4
CCDC43-204ENST00000588687 CTSL3PQ5NE16 218 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 PPP1R21Q6ZMI0 780 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 KBTBD2Q8IY47 623 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 UBL4BQ8N7F7 174 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 AMER2Q8N7J2 671 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 AMER3Q8N944 861 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 OR1N1Q8NGS0 311 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 VPS50Q96JG6 964 aa17.54■□□□□ 0.4
CCDC43-204ENST00000588687 ZC3H7BQ9UGR2 993 aaKnown RBP17.54■□□□□ 0.4
CCDC43-204ENST00000588687 TTC7AQ9ULT0 858 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-204ENST00000588687 PKDREJQ9NTG1 2253 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 IGHV1-45A0A0A0MS14 117 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 IDSB3KWA1 339 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 ETS1P14921 441 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 FDXRP22570 491 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 ELAVL4P26378 380 aaKnown RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 GRNP28799 593 aaKnown RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 STIP1P31948 543 aaKnown RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 TTPAP49638 278 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 EMP3P54852 163 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 OCA2Q04671 838 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 DSG2Q14126 1118 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 MUM1Q2TAK8 710 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 SKOR2Q2VWA4 1001 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 FBXO42Q6P3S6 717 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 NDUFAF7Q7L592 441 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 ITLN2Q8WWU7 325 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-204ENST00000588687 BIRC8Q96P09 236 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 PANX3Q96QZ0 392 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 ZFYVE21Q9BQ24 234 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 CHRAC1Q9NRG0 131 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 PLA2G3Q9NZ20 509 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 SPATA7Q9P0W8 599 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 PTGFRNQ9P2B2 879 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 GNPTGQ9UJJ9 305 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 CAPN6Q9Y6Q1 641 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 HIVEP1P15822 2718 aa17.53■□□□□ 0.4
CCDC43-204ENST00000588687 NSG1A0A0A6YYJ2 146 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 TRAV17A0A0B4J275 112 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 PRSS44E7EML9 344 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 FFAR3O14843 346 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 CD3EAPO15446 510 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 GPR42O15529 346 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 IPO7O95373 1038 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 MATN4O95460 622 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 GAS8O95995 478 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 SERPINA7P05543 415 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 PTMAP06454 111 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 FBLP22087 321 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 PPARGP37231 505 aaPredicted RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 SNRPNP63162 240 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 ARG2P78540 354 aa17.52■□□□□ 0.4
CCDC43-204ENST00000588687 SP5Q6BEB4 398 aaPredicted RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 PTRHD1Q6GMV3 140 aaKnown RBP17.52■□□□□ 0.4
CCDC43-204ENST00000588687 CNSTQ6PJW8 725 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms