RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ABCF3Q9NUQ8 709 aa18.44■□□□□ 0.54
CIRBP-217ENST00000588230 PDE10AQ9Y233 779 aa18.44■□□□□ 0.54
CIRBP-217ENST00000588230 MRPS18BQ9Y676 258 aaKnown RBP18.44■□□□□ 0.54
CIRBP-217ENST00000588230 FAM159BA6NKW6 160 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 CXorf49A8MYA2 514 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 ZSCAN9O15535 394 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 CCNDBP1O95273 360 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 TSPAN12O95859 305 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 HIST1H2AGP0C0S8 130 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 FAM87AP0C7U9 286 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 PRKAR1AP10644 381 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 HIST1H2ADP20671 130 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 SLC12A2P55011 1212 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 TAS2R39P59534 338 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 RPS15P62841 145 aaKnown RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 GLE1Q53GS7 698 aaKnown RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 THEMIS2Q5TEJ8 643 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 DSELQ8IZU8 1212 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 ZNF655Q8N720 491 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 CEP112Q8N8E3 955 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 HIST1H2AHQ96KK5 128 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 CPNE1Q99829 537 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 HIST1H2AJQ99878 128 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 H2AFJQ9BTM1 129 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 NDC1Q9BTX1 674 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 GPR87Q9BY21 358 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 TRIM54Q9BYV2 358 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 LRRC4CQ9HCJ2 640 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 PCMTD2Q9NV79 361 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 MTRF1LQ9UGC7 380 aaKnown RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 TAC3Q9UHF0 121 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 DMGDHQ9UI17 866 aaKnown RBP18.43■□□□□ 0.54
CIRBP-217ENST00000588230 PCDHGA6Q9Y5G7 932 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 KLK4Q9Y5K2 254 aa18.43■□□□□ 0.54
CIRBP-217ENST00000588230 CTSBP07858 339 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 AGXTP21549 392 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 IMPA1P29218 277 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 STX2P32856 288 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 RORAP35398 523 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 YBX1P67809 324 aaKnown RBP18.42■□□□□ 0.54
CIRBP-217ENST00000588230 PTCHD3Q3KNS1 767 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 ICE2Q659A1 982 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 CEP128Q6ZU80 1094 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 IFT81Q8WYA0 676 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 PDLIM5Q96HC4 596 aaKnown RBP18.42■□□□□ 0.54
CIRBP-217ENST00000588230 DPH2Q9BQC3 489 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-217ENST00000588230 SELENOSQ9BQE4 189 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 ARHGAP9Q9BRR9 750 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 FAM129AQ9BZQ8 928 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 UTP6Q9NYH9 597 aaKnown RBP18.42■□□□□ 0.54
CIRBP-217ENST00000588230 STOX2Q9P2F5 926 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-217ENST00000588230 SRPK3Q9UPE1 567 aa18.42■□□□□ 0.54
CIRBP-217ENST00000588230 H3BMH7 237 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CTSVO60911 334 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CREG1O75629 220 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 ZNF37AP17032 561 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 GP5P40197 560 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 ABATP80404 500 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 PRDX1Q06830 199 aaKnown RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CDC20Q12834 499 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 PHKG1Q16816 387 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 KBTBD12Q3ZCT8 623 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CRTC2Q53ET0 693 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 TCTE1Q5JU00 501 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 AGTRAPQ6RW13 159 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 ZNF517Q6ZMY9 492 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 LRRC56Q8IYG6 542 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 NKAPQ8N5F7 415 aaKnown RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 PPM1NQ8N819 430 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 FBF1Q8TES7 1133 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CATSPER2Q96P56 530 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 MCMBPQ9BTE3 642 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 ACTL8Q9H568 366 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 SLC6A20Q9NP91 592 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 CCDC177Q9NQR7 707 aaPredicted RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 TXLNGQ9NUQ3 528 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 ARL15Q9NXU5 204 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 SNX7Q9UNH6 387 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 FARSAQ9Y285 508 aaKnown RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 MTO1Q9Y2Z2 717 aaKnown RBP18.41■□□□□ 0.54
CIRBP-217ENST00000588230 HEATR5BQ9P2D3 2071 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 TENM4Q6N022 2769 aa18.41■□□□□ 0.54
CIRBP-217ENST00000588230 A0A0J9YVX5 310 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 OR2A25A4D2G3 310 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 SRPX2O60687 465 aaPredicted RBP18.4■□□□□ 0.54
CIRBP-217ENST00000588230 PLA2G2AP14555 144 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 PTPN4P29074 926 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 POU4F1Q01851 419 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 ERV3-1Q14264 604 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 ZNF460Q14592 562 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 ATP1A1-AS1Q5TC04 95 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 C1orf189Q5VU69 101 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 LCN10Q6JVE6 187 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 RHBDD2Q6NTF9 364 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 TMEM207Q6UWW9 146 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 MBOAT1Q6ZNC8 495 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 CEP97Q8IW35 865 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 PROKR1Q8TCW9 393 aa18.4■□□□□ 0.54
CIRBP-217ENST00000588230 ALKBH8Q96BT7 664 aaKnown RBP18.4■□□□□ 0.54
CIRBP-217ENST00000588230 TSPAN17Q96FV3 270 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms