RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 OR2A1Q8NGT9 310 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 PSMF1Q92530 271 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 HAS2Q92819 552 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 RELTQ969Z4 430 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 MIPEPQ99797 713 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 CATSPERZQ9NTU4 200 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 C3orf18Q9UK00 162 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 PACSIN2Q9UNF0 486 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-213ENST00000587604 TCAF1Q9Y4C2 921 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 NSG1A0A0A6YYJ2 146 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 TRAV17A0A0B4J275 112 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 PRSS44E7EML9 344 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 E7EVH7 732 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 PCDH17O14917 1159 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 FDXRP22570 491 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 PSMB5P28074 263 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 CCNFP41002 786 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 TNFSF10P50591 281 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 EMP3P54852 163 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 NAA30Q147X3 362 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-213ENST00000587604 INAQ16352 499 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 VWA2Q5GFL6 755 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 RNF44Q7L0R7 432 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 OTOAQ7RTW8 1153 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 LAPTM4BQ86VI4 370 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 PRSS58Q8IYP2 241 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 MAGEC3Q8TD91 643 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 C8orf44Q96CB5 159 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 MOCOSQ96EN8 888 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 MAGEB10Q96LZ2 347 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-213ENST00000587604 FOPNLQ96NB1 174 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 P2RY12Q9H244 342 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 RUBCNLQ9H714 662 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 CHRAC1Q9NRG0 131 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 MARCH4Q9P2E8 410 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-213ENST00000587604 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 GNPTGQ9UJJ9 305 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 CDC14AQ9UNH5 594 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 NFS1Q9Y697 457 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
DNMT1-213ENST00000587604 OTOGQ6ZRI0 2925 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 A0A1W2PPV9 198 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 A0A1W2PQ72 361 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 OR2A25A4D2G3 310 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 IFNB1P01574 187 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 SERPINA7P05543 415 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 PRR35P0CG20 571 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 COX6A1P12074 109 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 FBLP22087 321 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 RPS3P23396 243 aaKnown RBP eCLIP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 CXCR2P25025 360 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 SOX11P35716 441 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 BDKRB1P46663 353 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 EMP2P54851 167 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 NAA25Q14CX7 972 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 OASLQ15646 514 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 PRTGQ2VWP7 1150 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 ACRBPQ8NEB7 543 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 PPHLN1Q8NEY8 458 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 BRIX1Q8TDN6 353 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 ATG4AQ8WYN0 398 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 NR4A3Q92570 626 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 C10orf90Q96M02 699 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 ZFYVE21Q9BQ24 234 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 FRMD8P1Q9BZ68 369 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 UNKQ9C0B0 810 aaKnown RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 RAB6BQ9NRW1 208 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 STOX2Q9P2F5 926 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-213ENST00000587604 CPAMD8Q8IZJ3 1885 aa13.39□□□□□ -0.27
DNMT1-213ENST00000587604 ANKRD17O75179 2603 aaKnown RBP13.38□□□□□ -0.27
DNMT1-213ENST00000587604 IDSB3KWA1 339 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 H0YGG7 62 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 LIASO43766 372 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 NRP2O60462 931 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 BMP10O95393 424 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 FTCDO95954 541 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 APRTP07741 180 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 CMPK1P30085 196 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 KCNK10P57789 538 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 ARF3P61204 181 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-213ENST00000587604 ART3Q13508 389 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 CNSTQ6PJW8 725 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 RIPOR1Q6ZS17 1223 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 KIAA1328Q86T90 577 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
DNMT1-213ENST00000587604 MPP5Q8N3R9 675 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms