RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 TCF3P15923 654 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 PAX3P23760 479 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 MAPK1P28482 360 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 HPCAL1P37235 193 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 EMP3P54852 163 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 NFATC2Q13469 925 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 RAPSNQ13702 412 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 HIST2H2ACQ16777 129 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 HIST2H2AA3Q6FI13 130 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TMEM220Q6QAJ8 160 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 EPHX4Q8IUS5 362 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 WFDC5Q8TCV5 224 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TCRBV3S1A0A5B6 114 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 MAGEB17A8MXT2 336 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TARM1B6A8C7 271 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 RTCAO00442 366 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 RGS10O43665 173 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 MED26O95402 600 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 CXCL14O95715 111 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TGFBR1P36897 503 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 ALDH3A2P51648 485 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 EEFSECP57772 596 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TUBA4AP68366 448 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 RNASE12Q5GAN4 147 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 DPY19L3Q6ZPD9 716 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 IL17FQ96PD4 163 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 RHNO1Q9BSD3 238 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 FAM83DQ9H4H8 585 aa13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 CACYBPQ9HB71 228 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-209ENST00000587525 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 BCAS1O75363 584 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 DNTTP04053 509 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 LCKP06239 509 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 CD70P32970 193 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ETV3P41162 512 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 C6orf141Q5SZD1 244 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 MORN1Q5T089 497 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 KANK2Q63ZY3 851 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 Q6ZNX1 250 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 CARM1Q86X55 608 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 NDNFQ8TB73 568 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ACDQ96AP0 544 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 MCMBPQ9BTE3 642 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 B4GALT6Q9UBX8 382 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ITM2BQ9Y287 266 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 WNT6Q9Y6F9 365 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 M0QX08 132 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 TNFRSF11BO00300 401 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ZNF623O75123 536 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 PAPSS2O95340 614 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 BMP10O95393 424 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 FABP3P05413 133 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ELFN1P0C7U0 828 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 PFKLP17858 780 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 HOXD9P28356 352 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 MAGEA12P43365 314 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 PON2Q15165 354 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 SF3B4Q15427 424 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 TRIM48Q8IWZ4 208 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 MINDY1Q8N5J2 469 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 SETD9Q8NE22 299 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ANKRD60Q9BZ19 345 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 KDELR3O43731 214 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 RASAL1O95294 804 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 NUDT7P0C024 238 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 BPIP17213 487 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 ATF6P18850 670 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 RRM2P31350 389 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 PIGAP37287 484 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 FKBP1BP68106 108 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 TXNL4AP83876 142 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 PYCR3Q53H96 274 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 INO80DQ53TQ3 878 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 CTSL3PQ5NE16 218 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 NLGN4XQ8N0W4 816 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 C1orf74Q96LT6 269 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 SEZ6LQ9BYH1 1024 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 AGPAT4Q9NRZ5 378 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 KCNE2Q9Y6J6 123 aa13.37□□□□□ -0.27
CACNA1A-209ENST00000587525 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
CACNA1A-209ENST00000587525 ILVBLA1L0T0 632 aa13.36□□□□□ -0.27
CACNA1A-209ENST00000587525 SYN3O14994 580 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms