RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 AGTR2P50052 363 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 ASPHQ12797 758 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 PCBP2Q15366 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
VMP1-203ENST00000586245 ZXDCQ2QGD7 858 aaPredicted RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 HES3Q5TGS1 186 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 CDCP2Q5VXM1 449 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 METTL2BQ6P1Q9 378 aaKnown RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 ZNF574Q6ZN55 896 aaPredicted RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 OR2L3Q8NG85 312 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 FLVCR1-AS1Q8TAF5 88 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 ESAMQ96AP7 390 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 CCDC74BQ96LY2 380 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
VMP1-203ENST00000586245 PDP2Q9P2J9 529 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 PIEZO1Q92508 2521 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 PCNX2A6NKB5 2137 aa13.13□□□□□ -0.31
VMP1-203ENST00000586245 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 CLGNO14967 610 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
VMP1-203ENST00000586245 KATNA1O75449 491 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
VMP1-203ENST00000586245 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
VMP1-203ENST00000586245 THRAP10827 490 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 NPPBP16860 134 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 HRH2P25021 359 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 HPDP32754 393 aaPredicted RBP13.12□□□□□ -0.31
VMP1-203ENST00000586245 PIK3CGP48736 1102 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 PRKAA2P54646 552 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 ZFP36L1Q07352 338 aaKnown RBP13.12□□□□□ -0.31
VMP1-203ENST00000586245 CDC16Q13042 620 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 PDK4Q16654 411 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 KIAA1614Q5VZ46 1190 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 TMPRSS12Q86WS5 348 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 KMT5CQ86Y97 462 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 SLITRK4Q8IW52 837 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 FAM20CQ8IXL6 584 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 GALNT15Q8N3T1 639 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 ADAMTS14Q8WXS8 1223 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 PPM1MQ96MI6 270 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 PITPNM3Q9BZ71 974 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 STRADBQ9C0K7 418 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 MED4Q9NPJ6 270 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 SOHLH2Q9NX45 425 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 GPRC5BQ9NZH0 403 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 ANKMY1Q9P2S6 941 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
VMP1-203ENST00000586245 ANKRD12Q6UB98 2062 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 IGHV5-51A0A0C4DH38 117 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 LRRC14BA6NHZ5 514 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 CSO75390 466 aaKnown RBP13.11□□□□□ -0.31
VMP1-203ENST00000586245 ANKRD34CP0C6C1 535 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 CDH1P12830 882 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 JUPP14923 745 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 PVRP15151 417 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ST6GAL1P15907 406 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 EPB42P16452 691 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 GNAZP19086 355 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 IMPDH1P20839 514 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 MAGP20916 626 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
VMP1-203ENST00000586245 CCKBRP32239 447 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
VMP1-203ENST00000586245 GRIA3P42263 894 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 MLLT3P42568 568 aaPredicted RBP13.11□□□□□ -0.31
VMP1-203ENST00000586245 ETV4P43268 484 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ID4P47928 161 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 LSSP48449 732 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 SEPHS1P49903 392 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 SLC18A1P54219 525 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 CLDN6P56747 220 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 DNAJB13P59910 316 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 HERVK_113P63132 956 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 PCLAFQ15004 111 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ISXQ2M1V0 245 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ZNF678Q5SXM1 525 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 LIPMQ5VYY2 423 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ADCK2Q7Z695 626 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 B3GNT8Q7Z7M8 397 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 C19orf47Q8N9M1 422 aaKnown RBP13.11□□□□□ -0.31
VMP1-203ENST00000586245 RCBTB1Q8NDN9 531 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 SLC5A11Q8WWX8 675 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 KLHL6Q8WZ60 621 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 ZUFSPQ96AP4 578 aa13.11□□□□□ -0.31
VMP1-203ENST00000586245 GRAMD1AQ96CP6 724 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms