RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	PRRC2C	Q9Y520	2896 aa	Known RBP	15.81	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZNF839	A8K0R7	811 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	GFY	I3L273	518 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	DSCR3	O14972	297 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	TTI1	O43156	1089 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	CEACAM4	O75871	244 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	SEC31A	O94979	1220 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	ONECUT2	O95948	504 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	MCM3	P25205	808 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	FOLR3	P41439	243 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	SKIV2L2	P42285	1042 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	KLRB1	Q12918	225 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	ATP1A4	Q13733	1029 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	HIF1A	Q16665	826 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	MLIP	Q5VWP3	458 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	STEAP4	Q687X5	459 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	LRRC8E	Q6NSJ5	796 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	HIBCH	Q6NVY1	386 aa	Predicted RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	MRPL14	Q6P1L8	145 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	SUSD1	Q6UWL2	747 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	TTLL10	Q6ZVT0	673 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	ASB18	Q6ZVZ8	466 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	PIWIL4	Q7Z3Z4	852 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	TTC29	Q8NA56	475 aa	Predicted RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZNF480	Q8WV37	535 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	LRRC39	Q96DD0	335 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	SNF8	Q96H20	258 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	IP6K3	Q96PC2	410 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	NDN	Q99608	321 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	ACAT2	Q9BWD1	397 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	SLC22A11	Q9NSA0	550 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	CUTC	Q9NTM9	273 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	RNF14	Q9UBS8	474 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	TAC3	Q9UHF0	121 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	TRMT6	Q9UJA5	497 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	CHMP2B	Q9UQN3	213 aa		15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	PTRH2	Q9Y3E5	179 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-204	ENST00000585630	IGKV1-8	A0A0C4DH67	115 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	TP73	O15350	636 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	SRPX2	O60687	465 aa	Predicted RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	CCNDBP1	O95273	360 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	PDGFA	P04085	211 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	GABRB3	P28472	473 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	OTX2	P32243	289 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	RPA3	P35244	121 aa	Predicted RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	ELK3	P41970	407 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	PAFAH1B1	P43034	410 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	RRAD	P55042	308 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	VSX2	P58304	361 aa	Predicted RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	YBX1	P67809	324 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	TIAL1	Q01085	375 aa	Known RBP eCLIP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	FRMPD2B	Q6IN97	320 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	UGT3A1	Q6NUS8	523 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	CYHR1	Q6ZMK1	362 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	MED25	Q71SY5	747 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	TMEM102	Q8N9M5	508 aa	Predicted RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZFYVE21	Q9BQ24	234 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	DPH7	Q9BTV6	452 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	SLC25A23	Q9BV35	468 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	MLXIPL	Q9NP71	852 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	MRPS30	Q9NP92	439 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	TAS2R13	Q9NYV9	303 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	SLC17A6	Q9P2U8	582 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZC3H7B	Q9UGR2	993 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	TEX264	Q9Y6I9	313 aa		15.79	■□□□□ 0.12
CIRBP-204	ENST00000585630	DOCK10	Q96BY6	2186 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630		A0A0J9YVX5	310 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	ESPN	B1AK53	854 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630		E7ENX8	843 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	SYF2	O95926	243 aa	Known RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	IMPA1	P29218	277 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	RGS4	P49798	205 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	PGD	P52209	483 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	ITGA8	P53708	1063 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	ARL4C	P56559	192 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	TAP2	Q03519	686 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	SP140	Q13342	867 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	SSPN	Q14714	243 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	RBM20	Q5T481	1227 aa	Known RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	ICE2	Q659A1	982 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZNF425	Q6IV72	752 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	TRMT10B	Q6PF06	316 aa	Known RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	SYT10	Q6XYQ8	523 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	UBE2R2	Q712K3	238 aa	Predicted RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	COX15	Q7KZN9	410 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	PAQR7	Q86WK9	346 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	LRRC56	Q8IYG6	542 aa	Predicted RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	PPFIBP2	Q8ND30	876 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	CFAP36	Q96G28	342 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	PWWP2A	Q96N64	755 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	PLCD4	Q9BRC7	762 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	SLC26A1	Q9H2B4	701 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	WDR54	Q9H977	334 aa		15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	CORO1C	Q9ULV4	474 aa	Predicted RBP	15.78	■□□□□ 0.12
CIRBP-204	ENST00000585630	LOC105369274	A0A096LPK9	316 aa		15.77	■□□□□ 0.12
CIRBP-204	ENST00000585630	LOC102723532	A0A0G2JNH3	316 aa		15.77	■□□□□ 0.12
CIRBP-204	ENST00000585630	ZBTB14	O43829	449 aa		15.77	■□□□□ 0.12
CIRBP-204	ENST00000585630	ALB	P02768	609 aa		15.77	■□□□□ 0.12
CIRBP-204	ENST00000585630	UMOD	P07911	640 aa		15.77	■□□□□ 0.12
CIRBP-204	ENST00000585630	ATXN8OS	P0DMR3	200 aa		15.77	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms