RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 UBE2E3Q969T4 207 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SPDL1Q96EA4 605 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 LRGUKQ96M69 825 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 HAUS8Q9BT25 410 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 APOOQ9BUR5 198 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 TEX101Q9BY14 249 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 TRIM15Q9C019 465 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 MKRN2Q9H000 416 aaKnown RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 BTBD1Q9H0C5 482 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PCBD2Q9H0N5 130 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 DUSP15Q9H1R2 295 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 RNPEPL1Q9HAU8 725 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 SGK2Q9HBY8 427 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 CCDC177Q9NQR7 707 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 SDR39U1Q9NRG7 319 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 AIG1Q9NVV5 245 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 GPRC5BQ9NZH0 403 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 GIMAP2Q9UG22 337 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 ZNF225Q9UK10 706 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 POLR3HQ9Y535 204 aaPredicted RBP9.01□□□□□ -0.97
SS18-220ENST00000582092 OR1A2Q9Y585 309 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 PCDHGA11Q9Y5H2 935 aa9.01□□□□□ -0.97
SS18-220ENST00000582092 GPR179Q6PRD1 2367 aa9□□□□□ -0.97
SS18-220ENST00000582092 A0A1B0GTL3 188 aa9□□□□□ -0.97
SS18-220ENST00000582092 ANTXRLA6NF34 631 aa9□□□□□ -0.97
SS18-220ENST00000582092 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 RSL1D1O76021 490 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 SLC16A8O95907 504 aa9□□□□□ -0.97
SS18-220ENST00000582092 NPPAP01160 153 aa9□□□□□ -0.97
SS18-220ENST00000582092 PDYNP01213 254 aa9□□□□□ -0.97
SS18-220ENST00000582092 GABRG2P18507 467 aa9□□□□□ -0.97
SS18-220ENST00000582092 CXCR2P25025 360 aa9□□□□□ -0.97
SS18-220ENST00000582092 OXTRP30559 389 aa9□□□□□ -0.97
SS18-220ENST00000582092 HTR6P50406 440 aa9□□□□□ -0.97
SS18-220ENST00000582092 THOP1P52888 689 aa9□□□□□ -0.97
SS18-220ENST00000582092 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 ADPRHP54922 357 aa9□□□□□ -0.97
SS18-220ENST00000582092 DIO3P55073 304 aa9□□□□□ -0.97
SS18-220ENST00000582092 SESN3P58005 492 aa9□□□□□ -0.97
SS18-220ENST00000582092 PFN3P60673 137 aa9□□□□□ -0.97
SS18-220ENST00000582092 RPL6Q02878 288 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 DDX39BQ13838 428 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 FLOT2Q14254 428 aa9□□□□□ -0.97
SS18-220ENST00000582092 RCN1Q15293 331 aa9□□□□□ -0.97
SS18-220ENST00000582092 CYP2A13Q16696 494 aa9□□□□□ -0.97
SS18-220ENST00000582092 RSPO4Q2I0M5 234 aaPredicted RBP9□□□□□ -0.97
SS18-220ENST00000582092 VPS26BQ4G0F5 336 aa9□□□□□ -0.97
SS18-220ENST00000582092 COQ5Q5HYK3 327 aa9□□□□□ -0.97
SS18-220ENST00000582092 SAMD4BQ5PRF9 694 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 FRG2Q64ET8 278 aa9□□□□□ -0.97
SS18-220ENST00000582092 MED27Q6P2C8 311 aa9□□□□□ -0.97
SS18-220ENST00000582092 AAGABQ6PD74 315 aa9□□□□□ -0.97
SS18-220ENST00000582092 BLOC1S3Q6QNY0 202 aa9□□□□□ -0.97
SS18-220ENST00000582092 CYP20A1Q6UW02 462 aa9□□□□□ -0.97
SS18-220ENST00000582092 RNF165Q6ZSG1 346 aa9□□□□□ -0.97
SS18-220ENST00000582092 DGLUCYQ7Z3D6 616 aa9□□□□□ -0.97
SS18-220ENST00000582092 TRIM46Q7Z4K8 759 aa9□□□□□ -0.97
SS18-220ENST00000582092 PDZD3Q86UT5 571 aa9□□□□□ -0.97
SS18-220ENST00000582092 ZFAND4Q86XD8 727 aa9□□□□□ -0.97
SS18-220ENST00000582092 RGL4Q8IZJ4 473 aa9□□□□□ -0.97
SS18-220ENST00000582092 KRT78Q8N1N4 520 aa9□□□□□ -0.97
SS18-220ENST00000582092 SFRP1Q8N474 314 aa9□□□□□ -0.97
SS18-220ENST00000582092 LILRA3Q8N6C8 439 aaPredicted RBP9□□□□□ -0.97
SS18-220ENST00000582092 L3MBTL4Q8NA19 623 aa9□□□□□ -0.97
SS18-220ENST00000582092 HIPK4Q8NE63 616 aa9□□□□□ -0.97
SS18-220ENST00000582092 OR2T34Q8NGX1 318 aa9□□□□□ -0.97
SS18-220ENST00000582092 OR56A3Q8NH54 315 aa9□□□□□ -0.97
SS18-220ENST00000582092 RLN3Q8WXF3 142 aa9□□□□□ -0.97
SS18-220ENST00000582092 ASB12Q8WXK4 309 aa9□□□□□ -0.97
SS18-220ENST00000582092 CMTM7Q96FZ5 175 aa9□□□□□ -0.97
SS18-220ENST00000582092 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 FRG2BQ96QU4 278 aa9□□□□□ -0.97
SS18-220ENST00000582092 HBEGFQ99075 208 aa9□□□□□ -0.97
SS18-220ENST00000582092 MYOCQ99972 504 aa9□□□□□ -0.97
SS18-220ENST00000582092 BRINP2Q9C0B6 783 aa9□□□□□ -0.97
SS18-220ENST00000582092 VCX3BQ9H321 246 aa9□□□□□ -0.97
SS18-220ENST00000582092 IL1RL2Q9HB29 575 aa9□□□□□ -0.97
SS18-220ENST00000582092 SPAG4Q9NPE6 437 aa9□□□□□ -0.97
SS18-220ENST00000582092 MBNL1Q9NR56 388 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 SERGEFQ9UGK8 458 aa9□□□□□ -0.97
SS18-220ENST00000582092 CIDEBQ9UHD4 219 aa9□□□□□ -0.97
SS18-220ENST00000582092 SLC7A8Q9UHI5 535 aa9□□□□□ -0.97
SS18-220ENST00000582092 PSMD13Q9UNM6 376 aa9□□□□□ -0.97
SS18-220ENST00000582092 ZFR2Q9UPR6 939 aaKnown RBP9□□□□□ -0.97
SS18-220ENST00000582092 MAPRE3Q9UPY8 281 aa9□□□□□ -0.97
SS18-220ENST00000582092 INVSQ9Y283 1065 aa9□□□□□ -0.97
SS18-220ENST00000582092 TMED5Q9Y3A6 229 aa9□□□□□ -0.97
SS18-220ENST00000582092 GPR45Q9Y5Y3 372 aa9□□□□□ -0.97
SS18-220ENST00000582092 MUC22E2RYF6 1773 aaPredicted RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 C15orf38-AP3S2A0A0A6YYH1 394 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 A0A1W2PP18 115 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 A0A1W2PQF6 199 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 PDZK1P1A8MUH7 402 aa8.99□□□□□ -0.97
SS18-220ENST00000582092 LSM1O15116 133 aaKnown RBP8.99□□□□□ -0.97
SS18-220ENST00000582092 PRR35P0CG20 571 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms