RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	STEAP4	Q687X5	459 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRMT9	Q6P2P2	845 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ASB18	Q6ZVZ8	466 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	OVCH1	Q7RTY7	1134 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MAATS1	Q7Z4T9	603 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TAX1BP1	Q86VP1	789 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PALM2	Q8IXS6	379 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MCOLN3	Q8TDD5	553 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZNF480	Q8WV37	535 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MVB12A	Q96EY5	273 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	VPS50	Q96JG6	964 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FER1L6-AS2	Q96M78	137 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PKP4	Q99569	1192 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC30A3	Q99726	388 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MIPEP	Q99797	713 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PLCD4	Q9BRC7	762 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MRPS30	Q9NP92	439 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CUTC	Q9NTM9	273 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	DHCR7	Q9UBM7	475 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CIDEB	Q9UHD4	219 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PYCARD	Q9ULZ3	195 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TP53TG5	Q9Y2B4	290 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRRC2C	Q9Y520	2896 aa	Known RBP	12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FAM187A	A6NFU0	413 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708		E7ESA3	106 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PEX12	O00623	359 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CTSV	O60911	334 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	WISP1	O95388	367 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	AHSG	P02765	367 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	EZR	P15311	586 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ITGAX	P20702	1163 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ALAS2	P22557	587 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CCND1	P24385	295 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ELK3	P41970	407 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PGD	P52209	483 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SOX8	P57073	446 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MPP1	Q00013	466 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FASTK	Q14296	549 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MUM1	Q2TAK8	710 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	WASHC2D	Q5SRD0	308 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TEDDM1	Q5T9Z0	273 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	C1orf189	Q5VU69	101 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	GARNL3	Q5VVW2	1013 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MLIP	Q5VWP3	458 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ICE2	Q659A1	982 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZNF425	Q6IV72	752 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TTLL10	Q6ZVT0	673 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	UBE2R2	Q712K3	238 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FAM20C	Q8IXL6	584 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CPNE9	Q8IYJ1	553 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TEX19	Q8NA77	164 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CCDC138	Q96M89	665 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	DPH7	Q9BTV6	452 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC25A23	Q9BV35	468 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FAM129A	Q9BZQ8	928 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PARVB	Q9HBI1	364 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	NSMCE4A	Q9NXX6	385 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CDC14A	Q9UNH5	594 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KLHL20	Q9Y2M5	609 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PTRH2	Q9Y3E5	179 aa	Known RBP	12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZNF451	Q9Y4E5	1061 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FER1L5	A0AVI2	2057 aa		12.05	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HYKK	A2RU49	373 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ARGFX	A6NJG6	315 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	EFCAB8	A8MWE9	144 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PCDH17	O14917	1159 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TTI1	O43156	1089 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRPF4	O43172	522 aa	Known RBP eCLIP	12.04	□□□□□ -0.48	3e-8	■□□□□ 10.6
CDK5RAP3-222	ENST00000581708	CTSB	P07858	339 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PSMB5	P28074	263 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CARS	P49589	748 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ITGA8	P53708	1063 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IL2	P60568	153 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	NFKB2	Q00653	900 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KCNC4	Q03721	635 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CUL1	Q13616	776 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRTG	Q2VWP7	1150 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FBXO42	Q6P3S6	717 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MRGPRE	Q86SM8	312 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC26A11	Q86WA9	606 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PAQR7	Q86WK9	346 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IGDCC3	Q8IVU1	814 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MYO1H	Q8N1T3	1032 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CLEC1A	Q8NC01	280 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ANKRD7	Q92527	254 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PDLIM5	Q96HC4	596 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TRIM55	Q9BYV6	548 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CLMP	Q9H6B4	373 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC6A20	Q9NP91	592 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PPAN	Q9NQ55	473 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC22A11	Q9NSA0	550 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TMEM184C	Q9NVA4	438 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	WHRN	Q9P202	907 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	C5AR2	Q9P296	337 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ANKRD12	Q6UB98	2062 aa		12.04	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PABPN1L	A6NDY0	278 aa	Known RBP	12.03	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TP73	O15350	636 aa		12.03	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	EIF3H	O15372	352 aa	Known RBP eCLIP	12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms