RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PTRH1Q86Y79 214 aaKnown RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 BBOF1Q8ND07 529 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 ADAMTS17Q8TE56 1095 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 ZNF480Q8WV37 535 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 EEF1AKMT1Q8WVE0 214 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 ZNF285Q96NJ3 590 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 DPH7Q9BTV6 452 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 MRPS30Q9NP92 439 aaKnown RBP18.69■□□□□ 0.58
SREBF1-220ENST00000581707 SLC17A6Q9P2U8 582 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 NDOR1Q9UHB4 597 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 TLK1Q9UKI8 766 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 MED13Q9UHV7 2174 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 HEATR5BQ9P2D3 2071 aa18.69■□□□□ 0.58
SREBF1-220ENST00000581707 FAM187AA6NFU0 413 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 E7ENX8 843 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 SUV39H1O43463 412 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 KLF7O75840 302 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-220ENST00000581707 CD63P08962 238 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 TAP2Q03519 686 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 FRG1Q14331 258 aaKnown RBP18.68■□□□□ 0.58
SREBF1-220ENST00000581707 LACTB2Q53H82 288 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-220ENST00000581707 WASHC2DQ5SRD0 308 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 PAQR3Q6TCH7 311 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 SYT10Q6XYQ8 523 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 TTLL10Q6ZVT0 673 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 TTC29Q8NA56 475 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-220ENST00000581707 PPFIBP2Q8ND30 876 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 TRIM55Q9BYV6 548 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 SLC6A20Q9NP91 592 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 ENAMQ9NRM1 1142 aa18.68■□□□□ 0.58
SREBF1-220ENST00000581707 ANKRD12Q6UB98 2062 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 A0A0J9YVX5 310 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 A0A1B0GX78 115 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 OR2A25A4D2G3 310 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 ARGFXA6NJG6 315 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 NRP2O60462 931 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 CCNDBP1O95273 360 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 PRDX1Q06830 199 aaKnown RBP18.67■□□□□ 0.58
SREBF1-220ENST00000581707 SLC9A5Q14940 896 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 FAM214AQ32MH5 1076 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 YOD1Q5VVQ6 348 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-220ENST00000581707 ICE2Q659A1 982 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 FRMPD2BQ6IN97 320 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 FBXO42Q6P3S6 717 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 RNF44Q7L0R7 432 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 PALM2Q8IXS6 379 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 GPATCH11Q8N954 259 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 FBXO36Q8NEA4 188 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 MCOLN3Q8TDD5 553 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 PLCD4Q9BRC7 762 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 ERP44Q9BS26 406 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 ING2Q9H160 280 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 CUTCQ9NTM9 273 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 ANKMY1Q9P2S6 941 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 TAC3Q9UHF0 121 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 CORO1CQ9ULV4 474 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-220ENST00000581707 TP53TG5Q9Y2B4 290 aa18.67■□□□□ 0.58
SREBF1-220ENST00000581707 PTRH2Q9Y3E5 179 aaKnown RBP18.67■□□□□ 0.58
SREBF1-220ENST00000581707 LOC105369274A0A096LPK9 316 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 LOC102723532A0A0G2JNH3 316 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 FITM1A5D6W6 292 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 E7ESA3 106 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 DSCR3O14972 297 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 DNAJB5O75953 348 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 C8GP07360 202 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 C2orf54Q08AI8 447 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 MGAT5Q09328 741 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 CHAF1BQ13112 559 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 CALCOCO2Q13137 446 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 CBLBQ13191 982 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 SSPNQ14714 243 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 FASTKD3Q14CZ7 662 aaKnown RBP18.66■□□□□ 0.58
SREBF1-220ENST00000581707 THEMIS2Q5TEJ8 643 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 CPZQ66K79 652 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 TCTN3Q6NUS6 607 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 MRPL14Q6P1L8 145 aaKnown RBP18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ATG14Q6ZNE5 492 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 RAB43Q86YS6 212 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 OR4N4Q8N0Y3 316 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 MYO1HQ8N1T3 1032 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ZFYVE21Q9BQ24 234 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 DPH5Q9H2P9 285 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 PARVBQ9HBI1 364 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ACSS2Q9NR19 701 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 SLC22A11Q9NSA0 550 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ABCF3Q9NUQ8 709 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 UTP6Q9NYH9 597 aaKnown RBP18.66■□□□□ 0.58
SREBF1-220ENST00000581707 WHRNQ9P202 907 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ZFATQ9P243 1243 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 ADAMTS6Q9UKP5 1117 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 VWA7Q9Y334 891 aa18.66■□□□□ 0.58
SREBF1-220ENST00000581707 IGKV1-8A0A0C4DH67 115 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 HYKKA2RU49 373 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 RAD51CO43502 376 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 EIF2S1P05198 315 aaKnown RBP18.65■□□□□ 0.58
SREBF1-220ENST00000581707 PIM1P11309 404 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-220ENST00000581707 IMPA1P29218 277 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 OTX2P32243 289 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 FOLR3P41439 243 aa18.65■□□□□ 0.58
SREBF1-220ENST00000581707 CCL11P51671 97 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms