RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GLRBP48167 497 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 GUCY1A3Q02108 690 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 PCLAFQ15004 111 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 SLC5A12Q1EHB4 618 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 LIPMQ5VYY2 423 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 TAX1BP1Q86VP1 789 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 KMT5CQ86Y97 462 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 GPSM1Q86YR5 675 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 KIRREL3Q8IZU9 778 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 TCAIMQ8N3R3 496 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 AGBL5Q8NDL9 886 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 RCBTB1Q8NDN9 531 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 OR6Y1Q8NGX8 325 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 WDR36Q8NI36 951 aaKnown RBP14.97□□□□□ -0.01
SS18-216ENST00000580751 LRRC8CQ8TDW0 803 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 FBXL8Q96CD0 374 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 OR2A14Q96R47 310 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 MAP3K3Q99759 626 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 ZNF768Q9H5H4 540 aaKnown RBP14.97□□□□□ -0.01
SS18-216ENST00000580751 MANSC1Q9H8J5 431 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 UTP6Q9NYH9 597 aaKnown RBP14.97□□□□□ -0.01
SS18-216ENST00000580751 NUDT4Q9NZJ9 180 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 SEMA5BQ9P283 1151 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 KLK13Q9UKR3 277 aa14.97□□□□□ -0.01
SS18-216ENST00000580751 TNPO3Q9Y5L0 923 aaKnown RBP14.97□□□□□ -0.01
SS18-216ENST00000580751 A8MU76 341 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 E7ENX8 843 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 STX16-NPEPL1H3BU86 382 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 STX16O14662 325 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 KIF1CO43896 1103 aaKnown RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 GUCA1CO95843 209 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 SERPINE1P05121 402 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 NEFHP12036 1026 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 CCND1P24385 295 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 PEBP1P30086 187 aaKnown RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 ALDH3A1P30838 453 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 LSP1P33241 339 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 GMPRP36959 345 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 ARL4DP49703 201 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 HNMTP50135 292 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 TAP2Q03519 686 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 NAA25Q14CX7 972 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 C16orf72Q14CZ0 275 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 TGFBIQ15582 683 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 OR4D1Q15615 310 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 AGTRAPQ6RW13 159 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 MBOAT1Q6ZNC8 495 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 RAB11FIP2Q7L804 512 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 C2orf73Q8N5S3 287 aaPredicted RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 ZNF75CPQ92670 426 aaPredicted RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 EGFL8Q99944 293 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 TRMOQ9BU70 441 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 PCBD2Q9H0N5 130 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 CCDC177Q9NQR7 707 aaPredicted RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.01
SS18-216ENST00000580751 LOXL2Q9Y4K0 774 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 PCDHB11Q9Y5F2 797 aa14.96□□□□□ -0.01
SS18-216ENST00000580751 IGHV5-51A0A0C4DH38 117 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 A0A0J9YY10 115 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 A0A1W2PPV9 198 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 TMEM114B3SHH9 223 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 MAP3K7O43318 606 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 DLX3O60479 287 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 CCNDBP1O95273 360 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 ZBTB11O95625 1053 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 S100BP04271 92 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 MTHFD2P13995 350 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 IMPDH1P20839 514 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 GYS2P54840 703 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 ALDH18A1P54886 795 aaKnown RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 TBPL1P62380 186 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 GNGT1P63211 74 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 SHC2P98077 582 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 GALNT1Q10472 559 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 TSTA3Q13630 321 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 FASTKQ14296 549 aaKnown RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 SF1Q15637 639 aaKnown RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 CAPN13Q6MZZ7 669 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 C10orf107Q8IVU9 208 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 LRRC56Q8IYG6 542 aaPredicted RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 LMNTD1Q8N9Z9 388 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 PDPRQ8NCN5 879 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 FLVCR1-AS1Q8TAF5 88 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 KLHL6Q8WZ60 621 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 L3HYPDHQ96EM0 354 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 MED8Q96G25 268 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 SLC41A2Q96JW4 573 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 C1QTNF3Q9BXJ4 246 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 NRSN2Q9GZP1 204 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 C12orf65Q9H3J6 166 aaKnown RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 MLXIPLQ9NP71 852 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 INTS7Q9NVH2 962 aaKnown RBP14.95□□□□□ -0.02
SS18-216ENST00000580751 SOHLH2Q9NX45 425 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 ANGPTL2Q9UKU9 493 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 MSRB2Q9Y3D2 182 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 ANKRD12Q6UB98 2062 aa14.95□□□□□ -0.02
SS18-216ENST00000580751 MED19A0JLT2 244 aaPredicted RBP14.94□□□□□ -0.02
SS18-216ENST00000580751 PLD2O14939 933 aa14.94□□□□□ -0.02
SS18-216ENST00000580751 PRICKLE3O43900 615 aaPredicted RBP14.94□□□□□ -0.02
SS18-216ENST00000580751 NPHS1O60500 1241 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms