RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PRICKLE3O43900 615 aaPredicted RBP13.78□□□□□ -0.2
SKA2-205ENST00000580541 RASSF9O75901 435 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 SUPT7LO94864 414 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 C9P02748 559 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 UGT2B7P16662 529 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 GRK2P25098 689 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 CDC16Q13042 620 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 CCDC157Q569K6 752 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 ZNF678Q5SXM1 525 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 ICE2Q659A1 982 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 CYB5D1Q6P9G0 228 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 RBM44Q6ZP01 1051 aaKnown RBP13.78□□□□□ -0.2
SKA2-205ENST00000580541 TAX1BP1Q86VP1 789 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 KMT5CQ86Y97 462 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 OR2A1Q8NGT9 310 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 RSC1A1Q92681 617 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 TGM7Q96PF1 710 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 OR2A14Q96R47 310 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 TRMOQ9BU70 441 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 PITHD1Q9GZP4 211 aaPredicted RBP13.78□□□□□ -0.2
SKA2-205ENST00000580541 TWSG1Q9GZX9 223 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 EML4Q9HC35 981 aaKnown RBP13.78□□□□□ -0.2
SKA2-205ENST00000580541 INTS9Q9NV88 658 aaKnown RBP13.78□□□□□ -0.2
SKA2-205ENST00000580541 TMEM184CQ9NVA4 438 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 OGFRQ9NZT2 677 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 TAC3Q9UHF0 121 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 GVINP1Q7Z2Y8 2422 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 A0A1W2PPV9 198 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 UGDHO60701 494 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 ZBTB11O95625 1053 aaPredicted RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 OTCP00480 354 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 DHRS4L1P0CG22 281 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 ALDH3A1P30838 453 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 PLA2G5P39877 138 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 GDF5P43026 501 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 AGTR2P50052 363 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 NOVA1P51513 510 aaKnown RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 CCR8P51685 355 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 NAGLUP54802 743 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 SIM1P81133 766 aaPredicted RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 RELAQ04206 551 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 MN1Q10571 1320 aaPredicted RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 LAPTM5Q13571 262 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 PCLAFQ15004 111 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 HIST2H2ACQ16777 129 aaPredicted RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 RSPO4Q2I0M5 234 aaPredicted RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 PAGE2BQ5JRK9 111 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 TMTC4Q5T4D3 741 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 ATG16L1Q676U5 607 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 HIST2H2AA3Q6FI13 130 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 OR2L3Q8NG85 312 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 FAM76AQ8TAV0 307 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 MGARPQ8TDB4 240 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 SLC5A11Q8WWX8 675 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 ACAT2Q9BWD1 397 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 STRADBQ9C0K7 418 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 DRC3Q9H069 523 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
SKA2-205ENST00000580541 EHD1Q9H4M9 534 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 IPPKQ9H8X2 491 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 SPHK1Q9NYA1 384 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 PDP2Q9P2J9 529 aa13.77□□□□□ -0.21
SKA2-205ENST00000580541 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 KRT87PA6NCN2 255 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 E2F3O00716 465 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 NPHS1O60500 1241 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
SKA2-205ENST00000580541 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
SKA2-205ENST00000580541 CCNG1P51959 295 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 IRF8Q02556 426 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 CLCQ05315 142 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 MPP2Q14168 576 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 TBCCQ15814 346 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 ZC3H12BQ5HYM0 836 aaKnown RBP13.76□□□□□ -0.21
SKA2-205ENST00000580541 LIPJQ5W064 366 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 FIGLAQ6QHK4 219 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 FAM92BQ6ZTR7 304 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 PRSS42Q7Z5A4 293 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 UBE2E3Q969T4 207 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 DEPDC7Q96QD5 511 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 AIF1LQ9BQI0 150 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 CHRNA10Q9GZZ6 450 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 PELI2Q9HAT8 420 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms