RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 LRRTM4Q86VH4 590 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FNDC5Q8NAU1 212 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PDPRQ8NCN5 879 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR2L2Q8NH16 312 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PLAGL1Q9UM63 463 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 WDR37Q9Y2I8 494 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ANGPTL3Q9Y5C1 460 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PRAMEF33A0A0G2JMD5 474 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MGAT4DA6NG13 374 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CHURC1-FNTBB4DL54 471 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TPST1O60507 370 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MYCLP1P12525 358 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CAPN3P20807 821 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GNPDA1P46926 289 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ACADVLP49748 655 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CHN2P52757 468 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TRIM25Q14258 630 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LRRC32Q14392 662 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■□□□□ 10.2
CDK5RAP3-217ENST00000580287 LETMD1Q6P1Q0 360 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DUS1LQ6P1R4 473 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TSSK4Q6SA08 328 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IL27RAQ6UWB1 636 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GOLGA7Q7Z5G4 137 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CCL4L1Q8NHW4 92 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 VPS33AQ96AX1 596 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PDXPQ96GD0 296 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EPB41L1Q9H4G0 881 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GALNT8Q9NY28 637 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 EGFL7Q9UHF1 273 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPR34Q9UPC5 381 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NDUFAF1Q9Y375 327 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 QSOX1O00391 747 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KPNA5O15131 536 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AXIN1O15169 862 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CAPN1P07384 714 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IDO1P14902 403 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ATP4BP51164 291 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 TSTA3Q13630 321 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PTCHD3Q3KNS1 767 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC22A15Q8IZD6 547 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GJD3Q8N144 294 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PJA1Q8NG27 643 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GLMNQ92990 594 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SHDQ96IW2 340 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 WSB2Q9NYS7 404 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC22A14Q9Y267 594 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SNX13Q9Y5W8 968 aa12.3□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FAM149AA5PLN7 773 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR7A17O14581 309 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HNRNPRO43390 633 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 VPS4BO75351 444 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 STAMBPO95630 424 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SLC16A8O95907 504 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ANXA5P08758 320 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CKMT2P17540 419 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 DMWDQ09019 674 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GTF2H2Q13888 395 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GTF2H2CQ6P1K8 395 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZFP1Q6P2D0 407 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GCNT7Q6ZNI0 430 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR2T11Q8NH01 316 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 OR1E3Q8WZA6 343 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HIST1H2AHQ96KK5 128 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CIB1Q99828 191 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HIST1H2AJQ99878 128 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 H2AFJQ9BTM1 129 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CD244Q9BZW8 370 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 PFDN4Q9NQP4 134 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CHCHD3Q9NX63 227 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C6orf203Q9P0P8 240 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ABCA7Q8IZY2 2146 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CACNA1IQ9P0X4 2223 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 C7orf72A4D263 438 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 ZNF839A8K0R7 811 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 FFAR3O14843 346 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 VILLO15195 856 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 GPR42O15529 346 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 MPC1LP0DKB6 136 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HNRNPA2B1P22626 353 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 AK4P27144 223 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 HMOX2P30519 316 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 CLCNKAP51800 687 aa12.29□□□□□ -0.44
CDK5RAP3-217ENST00000580287 KCNK10P57789 538 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms