RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 CCNFP41002 786 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR3P46089 330 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 BDKRB1P46663 353 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 GABRA4P48169 554 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 LSSP48449 732 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ATXN3P54252 364 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TUBB4BP68371 445 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 IRF9Q00978 393 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ZFP36L1Q07352 338 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ILKQ13418 452 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 THOC5Q13769 683 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 BMPR2Q13873 1038 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 GTF2H3Q13889 308 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SLMAPQ14BN4 828 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TRIP6Q15654 476 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SEPT7Q16181 437 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PHKG1Q16816 387 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 BEND6Q5SZJ8 279 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM45BPQ6NSW5 357 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 EMBQ6PCB8 327 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 UNC5DQ6UXZ4 953 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TIFABQ6ZNK6 161 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TMEM26Q6ZUK4 368 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 EFL1Q7Z2Z2 1120 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PIWIL4Q7Z3Z4 852 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CMC1Q7Z7K0 106 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 B3GNT8Q7Z7M8 397 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SDCCAG8Q86SQ7 713 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF761Q86XN6 746 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM129CQ86XR2 697 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TDRPQ86YL5 185 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SPPL2CQ8IUH8 684 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PALM2Q8IXS6 379 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 KLHDC8AQ8IYD2 350 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CPNE9Q8IYJ1 553 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CFAP206Q8IYR0 622 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ADGRF3Q8IZF5 1079 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 IQCKQ8N0W5 287 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ZBTB2Q8N680 514 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PPM1NQ8N819 430 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 DCBLD1Q8N8Z6 715 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 LMNTD1Q8N9Z9 388 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MYRIPQ8NFW9 859 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR52E1Q8NGJ3 308 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR5AR1Q8NGP9 310 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR2W6PQ8NHA6 318 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 OR5K2Q8NHB8 316 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 UHMK1Q8TAS1 419 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 GDAP1Q8TB36 358 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 HMGCLL1Q8TB92 370 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 IFI44Q8TCB0 444 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM45AQ8TCE6 357 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 EEF1AKMT1Q8WVE0 214 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 JPH3Q8WXH2 748 aaPredicted RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ADAMTS14Q8WXS8 1223 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ELMO1Q92556 727 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 INPP5DQ92835 1189 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PTERQ96BW5 349 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM136AQ96C01 138 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 DCUN1D1Q96GG9 259 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 C12orf66Q96MD2 445 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TTC25Q96NG3 672 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PANX3Q96QZ0 392 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ATOH8Q96SQ7 321 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CYTH2Q99418 400 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PAFAH2Q99487 392 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CDC6Q99741 560 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CCDC3Q9BQI4 270 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TMEM109Q9BVC6 243 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TBC1D10AQ9BXI6 508 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 C1QTNF3Q9BXJ4 246 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PITPNM3Q9BZ71 974 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 RAB33BQ9H082 229 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TSPYL1Q9H0U9 437 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 IGSF5Q9NSI5 407 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SIDT1Q9NXL6 827 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 TMEM9Q9P0T7 183 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 SIRPGQ9P1W8 387 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CTNNAL1Q9UBT7 734 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM8A1Q9UBU6 413 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 FTSJ1Q9UET6 329 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MTRF1LQ9UGC7 380 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 LGALS13Q9UHV8 139 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 MOSPD1Q9UJG1 213 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 ACSL5Q9ULC5 683 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 PADI4Q9UM07 663 aa3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 CFAP20Q9Y6A4 193 aaKnown RBP3.67□□□□□ -1.82
SMARCE1-215ENST00000578995 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 ITPR1Q14643 2758 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 CACNA1GO43497 2377 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 EML6Q6ZMW3 1958 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 TRBV23OR9-2A0A075B6M9 112 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A087WUV0 522 aaPredicted RBP3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 IGKV1-8A0A0C4DH67 115 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 IGHV5-10-1A0A0J9YXX1 117 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A1W2PPM1 405 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 MED19A0JLT2 244 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms