RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CDC16Q13042 620 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 FASTKQ14296 549 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PCBP2Q15366 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PDK4Q16654 411 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PTCHD3Q3KNS1 767 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CFAP157Q5JU67 520 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 LIPMQ5VYY2 423 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ICE2Q659A1 982 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 UNQ6494/PRO21346Q6UXR6 183 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 USP53Q70EK8 1073 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 THOC6Q86W42 341 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KMT5CQ86Y97 462 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TRIM42Q8IWZ5 723 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 COL27A1Q8IZC6 1860 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TMEM151AQ8N4L1 468 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 C2orf73Q8N5S3 287 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ANKRD42Q8N9B4 389 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SNX31Q8N9S9 440 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 LMNTD1Q8N9Z9 388 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 LINC01555Q8NAE3 123 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 OR4D9Q8NGE8 314 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 OR56A3Q8NH54 315 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PPP1R14CQ8TAE6 165 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ATP6V1E2Q96A05 226 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GRAMD1AQ96CP6 724 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PHF21BQ96EK2 531 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MAGEB10Q96LZ2 347 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 DEPDC7Q96QD5 511 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PAIP2Q9BPZ3 127 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SGPP1Q9BX95 441 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CEP295Q9C0D2 2601 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 STRADBQ9C0K7 418 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MRPS30Q9NP92 439 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 OGFRQ9NZT2 677 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ANKMY1Q9P2S6 941 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TAC3Q9UHF0 121 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 EMCNQ9ULC0 261 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SNX7Q9UNH6 387 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SPEGQ15772 3267 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SPAARA0A1B0GVQ0 90 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 A0A1W2PQM1 296 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KRT87PA6NCN2 255 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TARM1B6A8C7 271 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 NTN3O00634 580 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 BIRC5O15392 142 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TAPBPO15533 448 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TRIM13O60858 407 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ZBTB11O95625 1053 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 C9P02748 559 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ANKRD34CP0C6C1 535 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MTHFD2P13995 350 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CREB1P16220 341 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 IMPDH1P20839 514 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 EEF1DP29692 281 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ARL1P40616 181 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 INHBCP55103 352 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 DNAJB13P59910 316 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 HERVK_113P63132 956 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PRDX1Q06830 199 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GTF2H2Q13888 395 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TMTC4Q5T4D3 741 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PHF19Q5T6S3 580 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CACHD1Q5VU97 1274 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GTF2H2CQ6P1K8 395 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 FAM92BQ6ZTR7 304 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PRSS42Q7Z5A4 293 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ADCK2Q7Z695 626 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 NUDCD3Q8IVD9 361 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 LRRC56Q8IYG6 542 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 DYDC1Q8WWB3 177 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SLC5A11Q8WWX8 675 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ZUFSPQ96AP4 578 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PYCR2Q96C36 320 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TMEM79Q9BSE2 394 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ACAT2Q9BWD1 397 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ERVK-6Q9BXR3 956 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TWSG1Q9GZX9 223 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SEMA6CQ9H3T2 930 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 FANCEQ9HB96 536 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 OXSMQ9NWU1 459 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SOHLH2Q9NX45 425 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SPHK1Q9NYA1 384 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SLC17A7Q9P2U7 560 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KLHL3Q9UH77 587 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ZMIZ1Q9ULJ6 1067 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ATXN7L1Q9ULK2 861 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SLC22A14Q9Y267 594 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KIF26BQ2KJY2 2108 aa10.87□□□□□ -0.67
CDK5RAP3-210ENST00000578733 A0A1W2PPV9 198 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 G3V2L1 256 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 H3BQF6 201 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PRICKLE3O43900 615 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 DLX3O60479 287 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SUPT7LO94864 414 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MLYCDO95822 493 aa10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 RPS17P08708 135 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SBK3P0C264 359 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms