RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 F2P00734 622 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 HTR1EP28566 365 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 SRSF11Q05519 484 aaKnown RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TUBB3Q13509 450 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TMEM125Q96AQ2 219 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ZFP3Q96NJ6 502 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 HEPHQ9BQS7 1158 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TBCCD1Q9NVR7 557 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 NINQ8N4C6 2090 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 CHRNA1P02708 482 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 STSP08842 583 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 IGFBP6P24592 240 aaPredicted RBP17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 ABHD18Q0P651 414 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 ST3GAL4Q11206 333 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 MTA1Q13330 715 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 PON2Q15165 354 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 LETMD1Q6P1Q0 360 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 USP7Q93009 1102 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 FCRL4Q96PJ5 515 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 TSPAN18Q96SJ8 248 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 WDR37Q9Y2I8 494 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 SMIM18P0DKX4 95 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 PRPS1L1P21108 318 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 NTSP30990 170 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 PCDH1Q08174 1060 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 ZFP90Q8TF47 636 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 TRUB1Q8WWH5 349 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 FUBP1Q96AE4 644 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 CLIP3Q96DZ5 547 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF607Q96SK3 696 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 OR51B5Q9H339 312 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC32A1Q9H598 525 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 IMP3Q9NV31 184 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 RIMKLBQ9ULI2 386 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 SPO11Q9Y5K1 396 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 TBC1D3BA6NDS4 549 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 M0R129 80 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 OR5F1O95221 314 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 GJB5O95377 273 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 GHRHRQ02643 423 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 TMEM220Q6QAJ8 160 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 RNF44Q7L0R7 432 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 PIANPQ8IYJ0 282 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 FBXO22Q8NEZ5 403 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 POF1BQ8WVV4 589 aa17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 RUVBL1Q9Y265 456 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-214ENST00000576409 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 PCDH7O60245 1069 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 BMP7P18075 431 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 RAB15P59190 212 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 MEF2AQ02078 507 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ATP13A5Q4VNC0 1218 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 KIAA1614Q5VZ46 1190 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 CCBE1Q6UXH8 406 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 DCDC5Q6ZRR9 648 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 SNX20Q7Z614 316 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 COL21A1Q96P44 957 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 PRDM8Q9NQV8 689 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 F5P12259 2224 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 KRBA1A5PL33 1030 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 PCP4L1A6NKN8 68 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 H0YAE9 185 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 PRAMEF11O60813 436 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 PAPSS2O95340 614 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 RPLP2P05387 115 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 MATN1P21941 496 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 IFNGR2P38484 337 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ASMTP46597 345 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 TUBA3CQ13748 450 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF544Q6NX49 715 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF730Q6ZMV8 503 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 MAL2Q969L2 176 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 BOCQ9BWV1 1114 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 MRPL9Q9BYD2 267 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 FZD9O00144 591 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ACOT8O14734 319 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 DUSP11O75319 330 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 CCNYL3P0C7X3 344 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 HPGDP15428 266 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 NR4A2P43354 598 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 SMN1Q16637 294 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 NHSL2Q5HYW2 709 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 RBM12BQ8IXT5 1001 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 NDNFQ8TB73 568 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 SUSD3Q96L08 255 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 ABCB8Q9NUT2 735 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 FLRT1Q9NZU1 646 aa17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 CFAP20Q9Y6A4 193 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-214ENST00000576409 A0A0U1RQF3 1178 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 TCRBV3S1A0A5B6 114 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 K7ERQ8 282 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SEPT4O43236 478 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 MAGEA3P43357 314 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 MAPK12P53778 367 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 CLCA4Q14CN2 919 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms