RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TAC3Q9UHF0 121 aa7.62□□□□□ -1.19
CCDC40-215ENST00000576033 CORO1CQ9ULV4 474 aaPredicted RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 MDC1Q14676 2089 aaKnown RBP7.62□□□□□ -1.19
CCDC40-215ENST00000576033 ACACAQ13085 2346 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 A0A0J9YY10 115 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CDRT15L2A8MXV6 281 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 C2orf74A8MZ97 194 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TRIM49D1C9J1S8 452 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 E7ENX8 843 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 F8W8V4 182 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 GOLGA8RI6L899 631 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 KPNA5O15131 536 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CTSVO60911 334 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 KRT38O76015 456 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 MED26O95402 600 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 MT-ND3P03897 115 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CATP04040 527 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ANKRD34CP0C6C1 535 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CBSLP0DN79 551 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CDK4P11802 303 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ENO3P13929 434 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 STMN1P16949 149 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 NELFEP18615 380 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 KRT4P19013 534 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 WT1P19544 449 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TAC1P20366 129 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ITPKBP27987 946 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CSTF2P33240 577 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 RPA3P35244 121 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SPRP35270 261 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CBSP35520 551 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SKIV2L2P42285 1042 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 MLLT3P42568 568 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 GDF5P43026 501 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 GABRA4P48169 554 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 RGS4P49798 205 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 IL2P60568 153 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 RAB10P61026 200 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 POU4F1Q01851 419 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 MEF2AQ02078 507 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PLOD1Q02809 727 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TAP2Q03519 686 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TUBB3Q13509 450 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PDK4Q16654 411 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CYP2A13Q16696 494 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TBC1D25Q3MII6 688 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 LGSNQ5TDP6 509 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 FRMPD2BQ6IN97 320 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ARMC6Q6NXE6 501 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 C6orf89Q6UWU4 347 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 NEK10Q6ZWH5 1172 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF771Q7L3S4 317 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TIPARPQ7Z3E1 657 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PIGWQ7Z7B1 504 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SYTL1Q8IYJ3 562 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 C4orf33Q8N1A6 199 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 AGBL5Q8NDL9 886 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 OR2L3Q8NG85 312 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 OR2A1Q8NGT9 310 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 OR1L3Q8NH93 324 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ACMSDQ8TDX5 336 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ZNF473Q8WTR7 871 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 RAD51AP1Q96B01 352 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 GRAMD1AQ96CP6 724 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ZDHHC12Q96GR4 267 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SLC41A2Q96JW4 573 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 MAGEB18Q96M61 343 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 TSNARE1Q96NA8 513 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 FOPNLQ96NB1 174 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SLC46A1Q96NT5 459 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 OR4K3Q96R72 315 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PITPNM3Q9BZ71 974 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 RAB33BQ9H082 229 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 C12orf65Q9H3J6 166 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 EPB41L1Q9H4G0 881 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 CCDC86Q9H6F5 360 aaKnown RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ALG9Q9H6U8 611 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 AKIRIN1Q9H9L7 192 aaPredicted RBP7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PCMTD2Q9NV79 361 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 NSMCE4AQ9NXX6 385 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 SLC39A1Q9NY26 324 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 NKIRAS1Q9NYS0 192 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 KLHL42Q9P2K6 505 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 EPHA6Q9UF33 1036 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 POLG2Q9UHN1 485 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 ZMIZ1Q9ULJ6 1067 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 GRID1Q9ULK0 1009 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 PCM1Q15154 2024 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 AHCTF1Q8WYP5 2266 aa7.61□□□□□ -1.19
CCDC40-215ENST00000576033 A0A096LPK6 155 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 FEZF1A0PJY2 475 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 TMEM150CB9EJG8 249 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 H3BMH7 237 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 UBXN8O00124 270 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 TK2O00142 265 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 NDUFAB1O14561 156 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 HAT1O14929 419 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 HGSO14964 777 aaPredicted RBP7.6□□□□□ -1.19
CCDC40-215ENST00000576033 TAPBPO15533 448 aa7.6□□□□□ -1.19
CCDC40-215ENST00000576033 P2RX6O15547 441 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms