RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 QSOX1O00391 747 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 CDK2AP1O14519 115 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 APOL1O14791 398 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ZNHIT1O43257 154 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ARHGEF9O43307 516 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PRMT3O60678 531 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SLC25A12O75746 678 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ATE1O95260 518 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 FKBP9O95302 570 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 LY6G6DO95868 133 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 RPN2P04844 631 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SP1P08047 785 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 CYC1P08574 325 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ANXA5P08758 320 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 C8orf89P0DMQ9 161 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PEBP1P30086 187 aaKnown RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 PKLRP30613 574 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 HOXC12P31275 282 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PTGER1P34995 402 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 KIR2DL3P43628 341 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 WNT3AP56704 352 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 VSX2P58304 361 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 TAS2R50P59544 299 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PLOD1Q02809 727 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 SLC10A2Q12908 348 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 NAA25Q14CX7 972 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 KRT31Q15323 416 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PCBP2Q15366 365 aaKnown RBP eCLIP5.58□□□□□ -1.523e-8■■□□□ 12.7
SMG6-219ENST00000575663 SLC1A5Q15758 541 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 MAPKAPK3Q16644 382 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 DPCR1Q3MIW9 517 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 TEX44Q53QW1 395 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SIRPB2Q5JXA9 342 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 WASHC2DQ5SRD0 308 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PLAG1Q6DJT9 500 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SPINK14Q6IE38 97 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SLC25A25Q6KCM7 469 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ARHGAP11AQ6P4F7 1023 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ARSKQ6UWY0 536 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SNX20Q7Z614 316 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 FGD2Q7Z6J4 655 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 GAS2L3Q86XJ1 694 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 CDC20BQ86Y33 519 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 CCDC71Q8IV32 467 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 CHERPQ8IWX8 916 aaKnown RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 PIAS4Q8N2W9 510 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 MARVELD2Q8N4S9 558 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PQLC3Q8N755 202 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 POGLUT1Q8NBL1 392 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 OR4K2Q8NGD2 314 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 OR10Q1Q8NGQ4 319 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 TMEM125Q96AQ2 219 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 FAF2Q96CS3 445 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 LRRC46Q96FV0 321 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 COX4I2Q96KJ9 171 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PWWP2AQ96N64 755 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ZNF285Q96NJ3 590 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 OLFM1Q99784 485 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 SYT11Q9BT88 431 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 KCNK13Q9HB14 408 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 GLOD4Q9HC38 313 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 MKKSQ9NPJ1 570 aaPredicted RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 ZC3H7BQ9UGR2 993 aaKnown RBP5.58□□□□□ -1.52
SMG6-219ENST00000575663 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PLAGL1Q9UM63 463 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 KLHL20Q9Y2M5 609 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 ARL5AQ9Y689 179 aa5.58□□□□□ -1.52
SMG6-219ENST00000575663 PRRC2AP48634 2157 aaKnown RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 FIGNL2A6NMB9 653 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 A6NNC1 897 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 RNF212BA8MTL3 300 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 LGALS16A8MUM7 142 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 INAFM1C9JVW0 142 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 FAM47E-STBD1D6RA91 191 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 MYO1FO00160 1098 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 NME2P1O60361 137 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 VPS26AO75436 327 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 SEC24DO94855 1032 aaPredicted RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 FTH1P02794 183 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 EIF2S1P05198 315 aaKnown RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 TPM3P06753 285 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 ZFXP17010 805 aaPredicted RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 NME2P22392 152 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 PTPN3P26045 913 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 ACRV1P26436 265 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 CD96P40200 585 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 GRIA3P42263 894 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 CHRNA4P43681 627 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 ARSEP51690 589 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 NUP107P57740 925 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 DCAF7P61962 342 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 NKX6-1P78426 367 aaPredicted RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 UBXN1Q04323 297 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 PMPCAQ10713 525 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 MPP3Q13368 585 aa5.57□□□□□ -1.52
SMG6-219ENST00000575663 FASTKQ14296 549 aaKnown RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 TAF1AQ15573 450 aaPredicted RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 SF1Q15637 639 aaKnown RBP5.57□□□□□ -1.52
SMG6-219ENST00000575663 EXT1Q16394 746 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms