RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 NCF1P14598 390 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 GRIA3P42263 894 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 ABATP80404 500 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 TUBB3Q13509 450 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 IL11RAQ14626 422 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 DCAF12Q5T6F0 453 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 PDPRQ8NCN5 879 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 USP7Q93009 1102 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 PYCR2Q96C36 320 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 ASPSCR1Q9BZE9 553 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 FGF21Q9NSA1 209 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 DKK4Q9UBT3 224 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 KLHL20Q9Y2M5 609 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 PCDHGA7Q9Y5G6 932 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 PCDHGA3Q9Y5H0 932 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 CHD8Q9HCK8 2581 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 HEATR5BQ9P2D3 2071 aa31.86■■■□□ 2.69
CTDNEP1-209ENST00000574205 TLDC2A0PJX2 215 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 MT-ND3P03897 115 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 KRT15P19012 456 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 ERVPABLB-1P60509 514 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 FIGLAQ6QHK4 219 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 LCA5Q86VQ0 697 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 CYP4X1Q8N118 509 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 ALKBH8Q96BT7 664 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 CD274Q9NZQ7 290 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 NVLO15381 856 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 YBX1P67809 324 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 PTCHD3Q3KNS1 767 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 SULT1C3Q6IMI6 304 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 LCTLQ6UWM7 567 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 UNQ6494/PRO21346Q6UXR6 183 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 CEACAM20Q6UY09 585 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 CDHR3Q6ZTQ4 885 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 EXT2Q93063 718 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 TEFMQ96QE5 360 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 ZPBPQ9BS86 351 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 APMAPQ9HDC9 416 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 FAM60AQ9NP50 221 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 ZNF358Q9NW07 568 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 NUDT4Q9NZJ9 180 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 ANKMY1Q9P2S6 941 aa31.85■■■□□ 2.69
CTDNEP1-209ENST00000574205 C9orf172C9J069 976 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 S100BP04271 92 aaPredicted RBP31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 TECRLQ5HYJ1 363 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 FCRL6Q6DN72 434 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 BPHLQ86WA6 291 aaPredicted RBP31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 MDM1Q8TC05 714 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 HNRNPLLQ8WVV9 542 aaKnown RBP31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 ZNF578Q96N58 590 aaPredicted RBP31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 HAUS8Q9BT25 410 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 DPH7Q9BTV6 452 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 TMEM109Q9BVC6 243 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 CCDC86Q9H6F5 360 aaKnown RBP31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 FANCEQ9HB96 536 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 SLC6A20Q9NP91 592 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 B3GALT1Q9Y5Z6 326 aa31.84■■■□□ 2.69
CTDNEP1-209ENST00000574205 FREM2Q5SZK8 3169 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 C1QTNF9BB2RNN3 333 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 RBP1P09455 135 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 C1QTNF9P0C862 333 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 PMEPA1Q969W9 287 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 CTRCQ99895 268 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 CNOT10Q9H9A5 744 aaKnown RBP31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 WWOXQ9NZC7 414 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 RARRES3Q9UL19 164 aa31.83■■■□□ 2.69
CTDNEP1-209ENST00000574205 FRYQ5TBA9 3013 aa31.82■■■□□ 2.69
CTDNEP1-209ENST00000574205 A0A1W2PPM1 405 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 SUPT3HB4E1H0 165 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 GOLGA8RI6L899 631 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 SUPT3HO75486 399 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 PYGBP11216 843 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 FGF5P12034 268 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 NPPBP16860 134 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 GGT5P36269 586 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 GPR19Q15760 415 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 TBC1D25Q3MII6 688 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 BEND6Q5SZJ8 279 aaPredicted RBP31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 PPP1R3BQ86XI6 285 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 MYRIPQ8NFW9 859 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 ZNF501Q96CX3 271 aaPredicted RBP31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 LGALS13Q9UHV8 139 aa31.82■■■□□ 2.68
CTDNEP1-209ENST00000574205 IGKV1-8A0A0C4DH67 115 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 OR2A25A4D2G3 310 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 UBXN8O00124 270 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 IPO13O94829 963 aaKnown RBP31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 MTHFD2P13995 350 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 SLC5A2P31639 672 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 SLC6A12P48065 614 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 C17orf64Q86WR6 236 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 KLHDC8AQ8IYD2 350 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 OR8K5Q8NH50 307 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 SCYL1Q96KG9 808 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 OR4K3Q96R72 315 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 PLCD4Q9BRC7 762 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 PTBP2Q9UKA9 531 aaKnown RBP31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 SLC22A14Q9Y267 594 aa31.81■■■□□ 2.68
CTDNEP1-209ENST00000574205 HRH2P25021 359 aa31.8■■■□□ 2.68
CTDNEP1-209ENST00000574205 GABRA4P48169 554 aa31.8■■■□□ 2.68
CTDNEP1-209ENST00000574205 ZNF425Q6IV72 752 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms