RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MLXIPLQ9NP71 852 aa9.24□□□□□ -0.93
NPLOC4-212ENST00000573328 TRMT1Q9NXH9 659 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-212ENST00000573328 TAC3Q9UHF0 121 aa9.24□□□□□ -0.93
NPLOC4-212ENST00000573328 RELNP78509 3460 aa9.24□□□□□ -0.93
NPLOC4-212ENST00000573328 SCN2AQ99250 2005 aa9.24□□□□□ -0.93
NPLOC4-212ENST00000573328 ZCWPW2A0A1B0GU75 182 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 A0A1W2PPV9 198 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 HYKKA2RU49 373 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 AGPSO00116 658 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 MYO1CO00159 1063 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 MASP2O00187 686 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PRICKLE3O43900 615 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SRPX2O60687 465 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ALOX12BO75342 701 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PSIP1O75475 530 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 UMODP07911 640 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ITGAXP20702 1163 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 FBLP22087 321 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ITGA3P26006 1051 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 CLCN7P51798 805 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PNLIPRP1P54315 467 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 MPP1Q00013 466 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 OCA2Q04671 838 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PTK6Q13882 451 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 MYBPC3Q14896 1274 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 NKG7Q16617 165 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 HSP90AA5PQ58FG0 334 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC6A19Q695T7 634 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 JMJD6Q6NYC1 403 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 OVCH1Q7RTY7 1134 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PPP1R32Q7Z5V6 425 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 LMNTD2Q8IXW0 634 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 DTWD1Q8N5C7 304 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 NAT8LQ8N9F0 302 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PPFIBP2Q8ND30 876 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ACTRT1Q8TDG2 376 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 TM9SF4Q92544 642 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 KCNJ9Q92806 393 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 RERGQ96A58 199 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 COL26A1Q96A83 441 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 VPS50Q96JG6 964 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 PKP4Q99569 1192 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 GPR21Q99679 349 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SMAD5Q99717 465 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC30A3Q99726 388 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 YIPF2Q9BWQ6 316 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC29A3Q9BZD2 475 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ILKAPQ9H0C8 392 aaPredicted RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 WDR54Q9H977 334 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ZNF304Q9HCX3 659 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC6A20Q9NP91 592 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC22A11Q9NSA0 550 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 IARS2Q9NSE4 1012 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 UTP6Q9NYH9 597 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 CTSFQ9UBX1 484 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 TRMT6Q9UJA5 497 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 FBXL4Q9UKA2 621 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 NXT1Q9UKK6 140 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 SNX12Q9UMY4 172 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 COMMD10Q9Y6G5 202 aa9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 UTP20O75691 2785 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-212ENST00000573328 LRRK2Q5S007 2527 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 LOC105369274A0A096LPK9 316 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 LOC102723532A0A0G2JNH3 316 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 OR2A25A4D2G3 310 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PABPN1LA6NDY0 278 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 SMAPO00193 183 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 DNALI1O14645 258 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ZBTB14O43829 449 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 SORBS2O94875 1100 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 SLC16A8O95907 504 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ALBP02768 609 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 UQCRHP07919 91 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ANXA5P08758 320 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 MPC1LP0DKB6 136 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ERGP11308 486 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ENO3P13929 434 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PGAM1P18669 254 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 GNLYP22749 145 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 MMP11P24347 488 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 HSD17B2P37059 387 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 MAGEA3P43357 314 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 GCGRP47871 477 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CD97P48960 835 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 YBX1P67809 324 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 AIMP2Q13155 320 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CRYMQ14894 314 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ARHGAP19Q14CB8 494 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 TUBB8Q3ZCM7 444 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PRR30Q53SZ7 412 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ICE2Q659A1 982 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms