RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 STIP1P31948 543 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 FDFT1P37268 417 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 CCNFP41002 786 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 GRIA1P42261 906 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 TTPAP49638 278 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 EMP2P54851 167 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 EMP3P54852 163 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PRAMEP78395 509 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 NAA25Q14CX7 972 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 CCSMST1Q4G0I0 132 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 VWA2Q5GFL6 755 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 FBXO42Q6P3S6 717 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 CNSTQ6PJW8 725 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 TMEM207Q6UWW9 146 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 LDB1Q86U70 411 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 UBL4BQ8N7F7 174 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 RNF214Q8ND24 703 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 OR2A1Q8NGT9 310 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 DNAJB8Q8NHS0 232 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ITLN2Q8WWU7 325 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PEX13Q92968 403 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 C10orf90Q96M02 699 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PANX3Q96QZ0 392 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZFYVE21Q9BQ24 234 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 LACRTQ9GZZ8 138 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 TSPY26PQ9H489 355 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ETNK1Q9HBU6 452 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ABI3Q9P2A4 366 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 STOX2Q9P2F5 926 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ANAPC5Q9UJX4 755 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 AMFRQ9UKV5 643 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 CDC14AQ9UNH5 594 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 MRPS2Q9Y399 296 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 TCAF1Q9Y4C2 921 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 NFS1Q9Y697 457 aa9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-205ENST00000572656 PIKFYVEQ9Y2I7 2098 aa9.4□□□□□ -0.91
TRAPPC1-205ENST00000572656 CACNA1DQ01668 2161 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 IGHV1-45A0A0A0MS14 117 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 TRGV8A0A0C4DH27 118 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 A0A1W2PPV9 198 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 TCRBV7S2A1N4TA0A589 114 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 OR2A25A4D2G3 310 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 SOWAHDA6NJG2 315 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MIF4GDA9UHW6 222 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 E7EVH7 732 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 KPNA5O15131 536 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CD3EAPO15446 510 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 PRPF4O43172 522 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 NRP2O60462 931 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 PHF2O75151 1096 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 UNC5CO95185 931 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 IPO7O95373 1038 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 WDPCPO95876 746 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 PTGER4P35408 488 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 BDKRB1P46663 353 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 DSG2Q14126 1118 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZXDCQ2QGD7 858 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 PRTGQ2VWP7 1150 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MTFR2Q6P444 385 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 OTOAQ7RTW8 1153 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 PEX26Q7Z412 305 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MRGPRGQ86SM5 289 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 LRRC6Q86X45 466 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 ZNF808Q8N4W9 903 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 SIRT6Q8N6T7 355 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 SKA2Q8WVK7 121 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MVB12AQ96EY5 273 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CCDC120Q96HB5 630 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CABS1Q96KC9 395 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 FOPNLQ96NB1 174 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 YIPF2Q9BWQ6 316 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 RNF32Q9H0A6 362 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 P2RY12Q9H244 342 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CHST11Q9NPF2 352 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CATSPERZQ9NTU4 200 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 RIC8BQ9NVN3 520 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 SPATA7Q9P0W8 599 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 MARCH4Q9P2E8 410 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 TRPC4Q9UBN4 977 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 GNPTGQ9UJJ9 305 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 CROCCQ5TZA2 2017 aa9.39□□□□□ -0.91
TRAPPC1-205ENST00000572656 FBN2P35556 2912 aa9.38□□□□□ -0.91
TRAPPC1-205ENST00000572656 LOC102723996A0A087X1L8 192 aa9.38□□□□□ -0.91
TRAPPC1-205ENST00000572656 KRT87PA6NCN2 255 aa9.38□□□□□ -0.91
TRAPPC1-205ENST00000572656 H0YGG7 62 aa9.38□□□□□ -0.91
TRAPPC1-205ENST00000572656 CCL21O00585 134 aa9.38□□□□□ -0.91
TRAPPC1-205ENST00000572656 VPS26AO75436 327 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms