RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF621Q6ZSS3 439 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 CHCHD4Q8N4Q1 142 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 BEND7Q8N7W2 519 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-205ENST00000571272 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 CDC26Q8NHZ8 85 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 MIR1-1HGQ9H1L0 117 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 POU2F3Q9UKI9 436 aa16.98■□□□□ 0.31
SCARF1-205ENST00000571272 CLIC1O00299 241 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 TBX1O43435 398 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 EOMESO95936 686 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 HOXB9P17482 250 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 ENGP17813 658 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 ITGALP20701 1170 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 CTGFP29279 349 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 C21orf33P30042 268 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 SERPINB1P30740 379 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 LIPAP38571 399 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 RPIAP49247 311 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PPP5CP53041 499 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 SELENBP1Q13228 472 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PRSS36Q5K4E3 855 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PDE12Q6L8Q7 609 aaKnown RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PRSS48Q7RTY5 328 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 TSPYL5Q86VY4 417 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 SKA2Q8WVK7 121 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 MYO19Q96H55 970 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 TPD52L3Q96J77 140 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 HSH2DQ96JZ2 352 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PANX1Q96RD7 426 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 CORO1BQ9BR76 489 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 C6orf62Q9GZU0 229 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 KIAA1522Q9P206 1035 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 OR2A25A4D2G3 310 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PGLSO95336 258 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 OXSR1O95747 527 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 IGHA2P01877 340 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 RPS3P23396 243 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 CHRNA6Q15825 494 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 ZNF362Q5T0B9 420 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 PIH1D2Q8WWB5 315 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 DNASE1L2Q92874 299 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 EPS8L2Q9H6S3 715 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 THUMPD1Q9NXG2 353 aaKnown RBP16.97■□□□□ 0.31
SCARF1-205ENST00000571272 ANKMY1Q9P2S6 941 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 OSGIN1Q9UJX0 560 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 ZNF451Q9Y4E5 1061 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 HSPE1-MOB4S4R3N1 261 aa16.97■□□□□ 0.31
SCARF1-205ENST00000571272 CPSF4O95639 269 aaKnown RBP16.96■□□□□ 0.31
SCARF1-205ENST00000571272 VIPP01282 170 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ANXA5P08758 320 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 CYBAP13498 195 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ACRV1P26436 265 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 KDELR2P33947 212 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ZXDCQ2QGD7 858 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-205ENST00000571272 PLEKHG6Q3KR16 790 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 GPR153Q6NV75 609 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ARMC8Q8IUR7 673 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 SCAIQ8N9R8 606 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 DNAJB8Q8NHS0 232 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 REXO4Q9GZR2 422 aaKnown RBP16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ERVK-11Q9UQG0 969 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 KCNK5O95279 499 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 DBTP11182 482 aaKnown RBP16.96■□□□□ 0.31
SCARF1-205ENST00000571272 COL6A1P12109 1028 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 KIR3DL1P43629 444 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 MVKQ03426 396 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 NPRL3Q12980 569 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 MTA1Q13330 715 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 MBTPS1Q14703 1052 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 VMACQ2NL98 169 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ADGRF1Q5T601 910 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 TAS1R1Q7RTX1 841 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 SLC7A5P1Q8MH63 180 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 APH1BQ8WW43 257 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 TRIB2Q92519 343 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 PROX1Q92786 737 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 REEP1Q9H902 201 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 ERVW-1Q9UQF0 538 aa16.96■□□□□ 0.31
SCARF1-205ENST00000571272 FPGTO14772 594 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ADAM12O43184 909 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 PRPS2P11908 318 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 BPIP17213 487 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 RPL17P18621 184 aaKnown RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ZXDBP98169 803 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 HECTD3Q5T447 861 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ENTHD1Q8IYW4 607 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 UBTD2Q8WUN7 234 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 RNF38Q9H0F5 515 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SLC32A1Q9H598 525 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 CCNB1IP1Q9NPC3 277 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ZNF840PA6NDX5 716 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 AIREO43918 545 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 RPLP2P05387 115 aaKnown RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 AQP1P29972 269 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 CCDC92Q53HC0 331 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms