RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 MAP2K4P45985 399 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 RELAQ04206 551 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 PAGE3Q5JUK9 113 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 FOXB2Q5VYV0 432 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 USP30Q70CQ3 517 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 KRT74Q7RTS7 529 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 HDDC2Q7Z4H3 204 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 VN1R5Q7Z5H4 357 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ABHD11Q8NFV4 315 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 C9orf43Q8TAL5 461 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SHKBP1Q8TBC3 707 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SLC29A3Q9BZD2 475 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 TM9SF3Q9HD45 589 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ERVK-18Q9QC07 812 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 A0A0D9SEW6 157 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 EBLN1P0CF75 366 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 MAGEA8P43361 318 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 FOXA1P55317 472 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 IL18Q14116 193 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ZDHHC20Q5W0Z9 365 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CHMP1BQ7LBR1 199 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CLEC14AQ86T13 490 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ZFAND4Q86XD8 727 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 TMEM102Q8N9M5 508 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 LGALS12Q96DT0 336 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 HSH2DQ96JZ2 352 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 LHPPQ9H008 270 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CFAP97Q9P2B7 532 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 DKK3Q9UBP4 350 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ZNF282Q9UDV7 671 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SNX7Q9UNH6 387 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SLC22A14Q9Y267 594 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 FGF4P08620 206 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ZNF26P17031 533 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 RPL17P18621 184 aaKnown RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 GSTM2P28161 218 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CENPAP49450 140 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CHRNA6Q15825 494 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ADGRF1Q5T601 910 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 NEK5Q6P3R8 708 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SIX5Q8N196 739 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 TMEM125Q96AQ2 219 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 C3orf30Q96M34 536 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 HERC2P3Q9BVR0 1158 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 AGPAT4Q9NRZ5 378 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 HEMK1Q9Y5R4 338 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 FABP12A6NFH5 140 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 SLC1A7O00341 560 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 PPP6CO00743 305 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 AP3D1O14617 1153 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 B4GAT1O43505 415 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 MT-ND2P03891 347 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ELFN1P0C7U0 828 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CTSEP14091 401 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 CD47Q08722 323 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 GNA13Q14344 377 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 C16orf62Q7Z3J2 963 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 OSBPL10Q9BXB5 764 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 MARCH7Q9H992 704 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 TPT1P8Q9HAU6 139 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 DHRS7Q9Y394 339 aa10.85□□□□□ -0.67
PCDHGA4-201ENST00000571252 ATG13O75143 517 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 BMP7P18075 431 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PSMA3P25788 255 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 SDC2P34741 201 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 RAB25P57735 213 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 GANABQ14697 944 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 KCNA10Q16322 511 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 DUOXA1Q1HG43 343 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 FBXO43Q4G163 708 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 DDI2Q5TDH0 399 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 C2orf73Q8N5S3 287 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 OR52L1Q8NGH7 329 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PTGESO14684 152 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 DHFRP00374 187 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 TUBB3Q13509 450 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 CCL14Q16627 93 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 HKDC1Q2TB90 917 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PTCHD3Q3KNS1 767 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 KANK2Q63ZY3 851 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 CARM1Q86X55 608 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 IGSF8Q969P0 613 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PLD4Q96BZ4 506 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PAAF1Q9BRP4 392 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MCMBPQ9BTE3 642 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MMP27Q9H306 513 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PAK1IP1Q9NWT1 392 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 RPS6KB2Q9UBS0 482 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 GTF2A1LQ9UNN4 478 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms