RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLCA1A8K7I4 914 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 DFFAO00273 331 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SYT5O00445 386 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 PES1O00541 588 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 KIF5CO60282 957 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 CDK14O94921 469 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SLU7O95391 586 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 TRBC1P01850 177 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 HRGP04196 525 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SERPING1P05155 500 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 EPXP11678 715 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 PON1P27169 355 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 EEF1DP29692 281 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 PRKCIP41743 596 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 GABRB2P47870 512 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ZFP36L2P47974 494 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 SPINT3P49223 89 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 MAXP61244 160 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 IL10RBQ08334 325 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 EXOC3L4Q17RC7 722 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SLC5A12Q1EHB4 618 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ZNF569Q5MCW4 686 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 KLHDC7AQ5VTJ3 777 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SPINK14Q6IE38 97 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 MRM1Q6IN84 353 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 FAM83HQ6ZRV2 1179 aaPredicted RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 ACAD11Q709F0 780 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 NDUFAF7Q7L592 441 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 WDR53Q7Z5U6 358 aaPredicted RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 SLFN11Q7Z7L1 901 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 MEX3DQ86XN8 651 aaKnown RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 SHISA5Q8N114 240 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 PGBD5Q8N414 524 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 RXFP2Q8WXD0 754 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ANKRD7Q92527 254 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SLCO2A1Q92959 643 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 INSM2Q96T92 566 aaPredicted RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 PIP5K1AQ99755 562 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 CRB3Q9BUF7 120 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SARGQ9BW04 601 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 SPATA16Q9BXB7 569 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 BEX2Q9BXY8 128 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 PITPNM3Q9BZ71 974 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 TP63Q9H3D4 680 aaPredicted RBP6.56□□□□□ -1.36
CHD3-213ENST00000571249 SIX2Q9NPC8 291 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 BRD7Q9NPI1 651 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ANKRD10Q9NXR5 420 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 CTSFQ9UBX1 484 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 Q9UFV3 132 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 GNPTGQ9UJJ9 305 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 NPFFR2Q9Y5X5 522 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 ZNF407Q9C0G0 2248 aa6.56□□□□□ -1.36
CHD3-213ENST00000571249 CR1P17927 2039 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PHF3Q92576 2039 aaKnown RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 A0A096LPE4 126 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 A0A1W2PNR3 127 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 A0A1W2PPZ6 126 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 MATN2O00339 956 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 BTN3A3O00478 584 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 FGF10O15520 208 aaPredicted RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 AKAP10O43572 662 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 GFPT2O94808 682 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 SOX30O94993 753 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 VSIG8P0DPA2 414 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 ITGAMP11215 1152 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 COX6A1P12074 109 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 UCHL3P15374 230 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 ZNF24P17028 368 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 CASQ1P31415 396 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 SDC4P31431 198 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 ADH7P40394 386 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PEX19P40855 299 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 GABRA4P48169 554 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 CARSP49589 748 aaKnown RBP6.55□□□□□ -1.36
CHD3-213ENST00000571249 RAB28P51157 221 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 JAM2P57087 298 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 GNG11P61952 73 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 HYAL2Q12891 473 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 ALS2CLQ60I27 953 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TLDC1Q6P9B6 456 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 GJB7Q6PEY0 223 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 CNSTQ6PJW8 725 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TTLL10Q6ZVT0 673 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 COX15Q7KZN9 410 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 IRF2BP2Q7Z5L9 587 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TRAPPC5Q8IUR0 188 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PRSS58Q8IYP2 241 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TXLNBQ8N3L3 684 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 TMEM35BQ8NCS4 154 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 MDS2Q8NDY4 140 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 GLYATL1Q969I3 302 aa6.55□□□□□ -1.36
CHD3-213ENST00000571249 PIGTQ969N2 578 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms