RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TK2O00142 265 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 ZSCAN9O15535 394 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 SRPX2O60687 465 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 PIAS1O75925 651 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 RECKO95980 971 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 IMPA1P29218 277 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 PGGT1BP53609 377 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 TAS2R39P59534 338 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 RPS15P62841 145 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 TCTE1Q5JU00 501 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 RHBDD2Q6NTF9 364 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 PCSK4Q6UW60 755 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CEP128Q6ZU80 1094 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 LRRC56Q8IYG6 542 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF655Q8N720 491 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CEP112Q8N8E3 955 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 VPS39Q96JC1 886 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CPNE1Q99829 537 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 DPH7Q9BTV6 452 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 TRIM54Q9BYV2 358 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 CHST8Q9H2A9 424 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 IRAK4Q9NWZ3 460 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 UTP6Q9NYH9 597 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 STOX2Q9P2F5 926 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 ANKMY1Q9P2S6 941 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 MTRF1LQ9UGC7 380 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 TAC3Q9UHF0 121 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 SRPK3Q9UPE1 567 aa13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-218ENST00000569569 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 OR2A25A4D2G3 310 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 CREG1O75629 220 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 CTSBP07858 339 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 RAB40ALP0C0E4 278 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF37AP17032 561 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 AGXTP21549 392 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 PTPN4P29074 926 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 STX2P32856 288 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 GP5P40197 560 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ARSFP54793 590 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 SLC12A2P55011 1212 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 YBX1P67809 324 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ABATP80404 500 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 POU4F1Q01851 419 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 CDC20Q12834 499 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 TBR1Q16650 682 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 KBTBD12Q3ZCT8 623 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 THEMIS2Q5TEJ8 643 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ICE2Q659A1 982 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 TMEM207Q6UWW9 146 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 PROKR1Q8TCW9 393 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ANKRD7Q92527 254 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 EXTL1Q92935 676 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 RBBP8Q99708 897 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 TSPYL1Q9H0U9 437 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 POPDC3Q9HBV1 291 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ENAMQ9NRM1 1142 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 TXLNGQ9NUQ3 528 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 MTO1Q9Y2Z2 717 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-218ENST00000569569 ATRXP46100 2492 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 A0A0J9YVX5 310 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 EIF4E1BA6NMX2 242 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 CTSVO60911 334 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 C1QAP02745 245 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ENO2P09104 434 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 CCND1P24385 295 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 SPRP35270 261 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 AP1S2P56377 157 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ERV3-1Q14264 604 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 PHKG1Q16816 387 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 PTCHD3Q3KNS1 767 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF385CQ66K41 422 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 LCN10Q6JVE6 187 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 FBXO42Q6P3S6 717 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 AGTRAPQ6RW13 159 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 CEP97Q8IW35 865 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 FBF1Q8TES7 1133 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 IFT81Q8WYA0 676 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ZNF285Q96NJ3 590 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 ZFYVE21Q9BQ24 234 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 NLNQ9BYT8 704 aa13.24□□□□□ -0.29
HERPUD1-218ENST00000569569 PCBD2Q9H0N5 130 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms