RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 NT5C1B-RDH14C9J2C7 533 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 H0YJX3 145 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PFDN6O15212 129 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SLC7A4O43246 635 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 HCRTO43612 131 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ITM2AO43736 263 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 AP1G1O43747 822 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 LYPLA1O75608 230 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ESRRBO95718 433 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CHRNA1P02708 482 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FESP07332 822 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 RETP07949 1114 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SLC35E2BP0CK96 405 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PIM1P11309 404 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 TFEBP19484 476 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 NCF2P19878 526 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 HLA-DPA1P20036 260 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ADRA1AP35348 466 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MAGEA11P43364 429 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CPA2P48052 419 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 LEPRP48357 1165 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PSMD8P48556 350 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SERPINH1P50454 418 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 TUBP50607 506 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PAPOLAP51003 745 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ATP4BP51164 291 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 YBEYP58557 167 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MGAT3Q09327 533 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 TBL3Q12788 808 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FOXI1Q12951 378 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CDC16Q13042 620 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZBTB17Q13105 803 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MED21Q13503 144 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ART3Q13508 389 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CYLC2Q14093 348 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SQLEQ14534 574 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PARP15Q460N3 678 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FLYWCH1Q4VC44 716 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FAM72AQ5TYM5 149 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PLPP4Q5VZY2 271 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SP5Q6BEB4 398 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 IL31Q6EBC2 164 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FAM72DQ6L9T8 149 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 NEPROQ6NW34 567 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM154Q6P9G4 183 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 RANBP10Q6VN20 620 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 HACD2Q6Y1H2 254 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 EFL1Q7Z2Z2 1120 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MAVSQ7Z434 540 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CMC1Q7Z7K0 106 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 KBTBD6Q86V97 674 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 FAM72BQ86X60 149 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 DEFB107AQ8IZN7 70 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PRR18Q8N4B5 295 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CHCHD4Q8N4Q1 142 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CELF5Q8N6W0 485 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF781Q8N8C0 355 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MRPL43Q8N983 215 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 Q8NA96 180 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ICA1LQ8NDH6 482 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 IPMKQ8NFU5 416 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CEP70Q8NHQ1 597 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 DTX3LQ8TDB6 740 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 C2orf15Q8WU43 125 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZFAND2BQ8WV99 257 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PRR11Q96HE9 360 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MAELQ96JY0 434 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 Q96MF0 132 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF778Q96MU6 729 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 KLHL32Q96NJ5 620 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF599Q96NL3 588 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 GBP5Q96PP8 586 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CYP2S1Q96SQ9 504 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PKMYT1Q99640 499 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 VRK1Q99986 396 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ECSITQ9BQ95 431 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 EFHD1Q9BUP0 239 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 GATA5Q9BWX5 397 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MRPL1Q9BYD6 325 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZYG11BQ9C0D3 744 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CXCL16Q9H2A7 254 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ELAC1Q9H777 363 aaKnown RBP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ZBTB26Q9HCK0 441 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 C8orf4Q9NR00 106 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CHRAC1Q9NRG0 131 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PNPOQ9NVS9 261 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 RBM22Q9NW64 420 aaKnown RBP eCLIP5.2□□□□□ -1.58
CAPN3-217ENST00000567817 OSER1Q9NX31 292 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 XPR1Q9UBH6 696 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SLC39A10Q9ULF5 831 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 TMCO1Q9UM00 188 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PSMD13Q9UNM6 376 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 SCML2Q9UQR0 700 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 POMPQ9Y244 141 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 MFHAS1Q9Y4C4 1052 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PCDHB7Q9Y5E2 793 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 ASPMQ8IZT6 3477 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 PLXNA4Q9HCM2 1894 aa5.2□□□□□ -1.58
CAPN3-217ENST00000567817 CITO14578 2027 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms