RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 RARRES3Q9UL19 164 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 OARD1Q9Y530 152 aa11.93□□□□□ -0.5
RNF40-211ENST00000567365 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
RNF40-211ENST00000567365 ATRXP46100 2492 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 STMND1H3BQB6 276 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 EFSO43281 561 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 STK17BO94768 372 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SYF2O95926 243 aaKnown RBP11.92□□□□□ -0.5
RNF40-211ENST00000567365 INHBAP08476 426 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 NPPBP16860 134 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SERPINB9P50453 376 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ATP6V0D1P61421 351 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TBPL1P62380 186 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TLE3Q04726 772 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TGFBIQ15582 683 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ERCC6LQ2NKX8 1250 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 COL28A1Q2UY09 1125 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 CDKL4Q5MAI5 379 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TMTC4Q5T4D3 741 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 CYB5D1Q6P9G0 228 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ZNF517Q6ZMY9 492 aaPredicted RBP11.92□□□□□ -0.5
RNF40-211ENST00000567365 RNF44Q7L0R7 432 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 PAQR7Q86WK9 346 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 PPP1R3BQ86XI6 285 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SYTL1Q8IYJ3 562 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SPATA6LQ8N4H0 392 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SLC38A9Q8NBW4 561 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 MZB1Q8WU39 189 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 KIAA1191Q96A73 305 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 OR4K3Q96R72 315 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 MIPEPQ99797 713 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ACAT2Q9BWD1 397 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 INTS7Q9NVH2 962 aaKnown RBP11.92□□□□□ -0.5
RNF40-211ENST00000567365 ARL15Q9NXU5 204 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 EURLQ9NYK6 297 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 CTNNAL1Q9UBT7 734 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TAC3Q9UHF0 121 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 SH2B3Q9UQQ2 575 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
RNF40-211ENST00000567365 TEX51A0A1B0GUA7 166 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 TERTO14746 1132 aaKnown RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 RAD1O60671 282 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 CNTFP26441 200 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ITPKBP27987 946 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 CMPK1P30085 196 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 RPA3P35244 121 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 RORAP35398 523 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 GGT5P36269 586 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 MSH2P43246 934 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 SLC6A12P48065 614 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ARL4DP49703 201 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ABATP80404 500 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 IRF9Q00978 393 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 NAE1Q13564 534 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 CSHL1Q14406 222 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 RASA2Q15283 850 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 DEFB110Q30KQ9 67 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 PRAMEF17Q5VTA0 474 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 PRAMEF13Q5VWM6 474 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 LCTLQ6UWM7 567 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 TIFABQ6ZNK6 161 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 PLD6Q8N2A8 252 aaKnown RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 PDPRQ8NCN5 879 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 RHBDF1Q96CC6 855 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 NXNL1Q96CM4 212 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 PLCD4Q9BRC7 762 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 DPH7Q9BTV6 452 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 TRIM54Q9BYV2 358 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 UNKQ9C0B0 810 aaKnown RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 PCBD2Q9H0N5 130 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ATG10Q9H0Y0 220 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 AKIRIN1Q9H9L7 192 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 CCDC177Q9NQR7 707 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 CUEDC1Q9NWM3 386 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 UTP6Q9NYH9 597 aaKnown RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNF40-211ENST00000567365 RAB21Q9UL25 225 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 PLCL2Q9UPR0 1127 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 ACOT9Q9Y305 439 aa11.91□□□□□ -0.5
RNF40-211ENST00000567365 V9GYY5 206 aaPredicted RBP11.91□□□□□ -0.5
RNF40-211ENST00000567365 A0A087X1B8 175 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 A0A096LPK6 155 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 CCDC189A1A4V9 331 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 TMEM150CB9EJG8 249 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 TAPBPO15533 448 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 RFPL1O75677 317 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms