RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 BICD1Q96G01 975 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 SLC2A11Q9BYW1 496 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 NYXQ9GZU5 481 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 SNX25Q9H3E2 840 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 KLHL9Q9P2J3 617 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 KCNK6Q9Y257 313 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 USP54Q70EL1 1684 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 MAP3K5Q99683 1374 aa5.55□□□□□ -1.52
KARS-208ENST00000566772 C5P01031 1676 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 KPNA7A9QM74 516 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 H0YIG0 161 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 SOCS6O14544 535 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 NOL3O60936 208 aaKnown RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 ATP9AO75110 1047 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 GSRP00390 522 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 TGFAP01135 160 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 CDKN1AP38936 164 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 RPL3P39023 403 aaKnown RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 NPBWR1P48145 328 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 PLCD1P51178 756 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 KCNJ10P78508 379 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 COG7P83436 770 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 ID2Q02363 134 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 GCNT1Q02742 428 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 PDE7AQ13946 482 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 VEZF1Q14119 521 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 GAMTQ14353 236 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 MAPK11Q15759 364 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 HSP90AA5PQ58FG0 334 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 KCTD11Q693B1 232 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 BTNL8Q6UX41 500 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 ARMC9Q7Z3E5 817 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 ARHGAP22Q7Z5H3 698 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 CTU1Q7Z7A3 348 aaKnown RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 CHERPQ8IWX8 916 aaKnown RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 KIAA0895Q8NCT3 520 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 SEMA6DQ8NFY4 1073 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 EXOC6Q8TAG9 804 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 TMEM186Q96B77 213 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 TRIM44Q96DX7 344 aaPredicted RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 MTERF3Q96E29 417 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 CDKN2AIPNLQ96HQ2 116 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 EPSTI1Q96J88 318 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 VPS39Q96JC1 886 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 MTERF1Q99551 399 aaKnown RBP5.54□□□□□ -1.52
KARS-208ENST00000566772 ZNF559Q9BR84 538 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 ISCUQ9H1K1 167 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 NOX4Q9NPH5 578 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 MAD2L2Q9UI95 211 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 PACSIN3Q9UKS6 424 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 LY75O60449 1722 aa5.54□□□□□ -1.52
KARS-208ENST00000566772 FAM205AQ6ZU69 1335 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 ATXN2Q99700 1313 aaKnown RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 C2orf92A0A1B0GVN3 265 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 NPIPB8E9PQR5 432 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 MS4A18H0YCH9 400 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 MT-ATP6P00846 226 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 CYP19A1P11511 503 aaPredicted RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 SFNP31947 248 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 PTGER4P35408 488 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 CDX1P47902 265 aaPredicted RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 RFX5P48382 616 aaPredicted RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 GALK2Q01415 458 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 TRAF1Q13077 416 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 PRKAA1Q13131 559 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 RAB6CQ53S08 254 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 SYT14P1Q58G82 188 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 GRTP1Q5TC63 336 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 RGMBQ6NW40 437 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 NEK5Q6P3R8 708 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 PARM1Q6UWI2 310 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 Q75L30 129 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 MARK2Q7KZI7 788 aaKnown RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 PHLDB2Q86SQ0 1253 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 MAP7D3Q8IWC1 876 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 ZNF34Q8IZ26 560 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 OR52I2Q8NH67 350 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 WFIKKN2Q8TEU8 576 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 SEMA4DQ92854 862 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 DTD2Q96FN9 168 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 KCNK16Q96T55 309 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 ACPTQ9BZG2 426 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 RAB6CQ9H0N0 254 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 DPH5Q9H2P9 285 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 RWDD1Q9H446 243 aaPredicted RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 POLE3Q9NRF9 147 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.53□□□□□ -1.52
KARS-208ENST00000566772 TXNDC16Q9P2K2 825 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 CCPG1Q9ULG6 757 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 PCDHA12Q9UN75 941 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 EXOC7Q9UPT5 735 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 NUDCQ9Y266 331 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 EDC4Q6P2E9 1401 aaKnown RBP5.53□□□□□ -1.52
KARS-208ENST00000566772 ATP10DQ9P241 1426 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 USP47Q96K76 1375 aa5.53□□□□□ -1.52
KARS-208ENST00000566772 SMG6Q86US8 1419 aaKnown RBP5.52□□□□□ -1.53
KARS-208ENST00000566772 TRBV2A0A0J9YWF9 115 aa5.52□□□□□ -1.53
KARS-208ENST00000566772 hDV102S1A0JD36 115 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms