RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 DEFB110Q30KQ9 67 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 ZC3H12BQ5HYM0 836 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 PRAMEF17Q5VTA0 474 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 FCRL6Q6DN72 434 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 LRRC56Q8IYG6 542 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC38A9Q8NBW4 561 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 PPFIBP2Q8ND30 876 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 LSM14AQ8ND56 463 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 OR2A1Q8NGT9 310 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 ANKRD7Q92527 254 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 CLIP3Q96DZ5 547 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 WBP1Q96G27 269 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 MIPEPQ99797 713 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 IL17BQ9UHF5 180 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 KLHL20Q9Y2M5 609 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 AP1M2Q9Y6Q5 423 aa13.29□□□□□ -0.28
HERPUD1-210ENST00000565966 ATMQ13315 3056 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 A0A087WUV0 522 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 HMX2A2RU54 273 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 C21orf140B9A014 251 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 E7ENX8 843 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 H3BMH7 237 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 MEN1O00255 615 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CDC7O00311 574 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 TERTO14746 1132 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 ATXN7O15265 892 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF749O43361 778 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 OR2B3O76000 313 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 ITGB2P05107 769 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 ABHD2P08910 425 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 F8A1P23610 371 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CMPK1P30085 196 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 GRIA3P42263 894 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 RAB10P61026 200 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CYP4F2P78329 520 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 TAP2Q03519 686 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 GPS2Q13227 327 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 DNASE1L3Q13609 305 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 NAA25Q14CX7 972 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CRTC2Q53ET0 693 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 TAF1BQ53T94 588 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM199XQ6PEV8 388 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 SBSNQ6UWP8 590 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 MBOAT1Q6ZNC8 495 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CMC1Q7Z7K0 106 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 DSELQ8IZU8 1212 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CT55Q8WUE5 264 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 SLC44A1Q8WWI5 657 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 STARD8Q92502 1023 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 TTC9Q92623 222 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 MR1Q95460 341 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 CCDC138Q96M89 665 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 SPRTNQ9H040 489 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 NOVA2Q9UNW9 492 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 PCDHGA6Q9Y5G7 932 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 KLK4Q9Y5K2 254 aa13.28□□□□□ -0.28
HERPUD1-210ENST00000565966 NPEPPSL1A6NEC2 478 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 NKX2-8O15522 239 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 RIPK2O43353 540 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 KATNA1O75449 491 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 ENO2P09104 434 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 HIST1H2AGP0C0S8 130 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 CCDC166P0CW27 439 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 HIST1H2ADP20671 130 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 RORAP35398 523 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 GMPRP36959 345 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 YBX1P67809 324 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 PRDX1Q06830 199 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 TSTA3Q13630 321 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 MROH9Q5TGP6 573 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 MCATQ8IVS2 390 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 SPATA6LQ8N4H0 392 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 HIST1H2AHQ96KK5 128 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 CATSPER2Q96P56 530 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 BBC3Q96PG8 261 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 PAFAH2Q99487 392 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 HIST1H2AJQ99878 128 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 DPH2Q9BQC3 489 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 H2AFJQ9BTM1 129 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 TRIM54Q9BYV2 358 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms