RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CPNE7Q9UBL6 633 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 MARCOQ9UEW3 520 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 STK38LQ9Y2H1 464 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 RAP2CQ9Y3L5 183 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 CABIN1Q9Y6J0 2220 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 A0A1B0GTQ1 180 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 E7ENX8 843 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 PPP6CO00743 305 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 UBFD1O14562 309 aaKnown RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 YKT6O15498 198 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 KATNA1O75449 491 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 OTCP00480 354 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 TROVE2P10155 538 aaKnown RBP eCLIP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 KITP10721 976 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 ERGP11308 486 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 XRCC1P18887 633 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 RAB28P51157 221 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 CLDN6P56747 220 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 TAP2Q03519 686 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 CYP4F3Q08477 520 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 BNIP3Q12983 259 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 CDC16Q13042 620 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SHBQ15464 509 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 HLA-BQ31612 363 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SH2D4BQ5SQS7 431 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 IL27RAQ6UWB1 636 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 GPRIN3Q6ZVF9 776 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SFTPA2Q8IWL1 248 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 LRRC56Q8IYG6 542 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 AVL9Q8NBF6 648 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 OR2L8Q8NGY9 312 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 PIWIL2Q8TC59 973 aaKnown RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 AGAP11Q8TF27 550 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 JPH3Q8WXH2 748 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SMPDL3AQ92484 453 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 ATP6V1E2Q96A05 226 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 GRAMD1AQ96CP6 724 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF382Q96SR6 550 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 NRTNQ99748 197 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SGPP1Q9BX95 441 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 XKR8Q9H6D3 395 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 IPPKQ9H8X2 491 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 PNPOQ9NVS9 261 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 HAO1Q9UJM8 370 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 ICKQ9UPZ9 632 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 SLC22A14Q9Y267 594 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.72□□□□□ -0.69
SF3B3-205ENST00000564899 DYRK1BQ9Y463 629 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 CSNK1G3Q9Y6M4 447 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 MYO18BQ8IUG5 2567 aa10.72□□□□□ -0.69
SF3B3-205ENST00000564899 COL12A1Q99715 3063 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 OR7A17O14581 309 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 DFNA5O60443 496 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CRCPO75575 148 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 TGDSO95455 350 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 ESRRBO95718 433 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CER1O95813 267 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 FAM107AO95990 144 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SYPP08247 313 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 EPORP19235 508 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CCND1P24385 295 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SHMT2P34897 504 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 RPL14P50914 215 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CCT8P50990 548 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CCNG1P51959 295 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 PKNOX1P55347 436 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 MAZP56270 477 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SH3BP2P78314 561 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 HHEXQ03014 270 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SF3A3Q12874 501 aaKnown RBP eCLIP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 TRAF3Q13114 568 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 GPR18Q14330 331 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 THEMIS2Q5TEJ8 643 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 PRAMEF13Q5VWM6 474 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 CGB2Q6NT52 195 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SUSD1Q6UWL2 747 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SYVN1Q86TM6 617 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 RBM12BQ8IXT5 1001 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 KIRREL3Q8IZU9 778 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 AFAP1L2Q8N4X5 818 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 C2orf73Q8N5S3 287 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 LINC01555Q8NAE3 123 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 OR52B6Q8NGF0 335 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 HMGCLL1Q8TB92 370 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 BAHD1Q8TBE0 780 aaPredicted RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF473Q8WTR7 871 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 ZFPM2Q8WW38 1151 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 SH3KBP1Q96B97 665 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 THOC1Q96FV9 657 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 MIPEPQ99797 713 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 ELAC2Q9BQ52 826 aaKnown RBP10.71□□□□□ -0.69
SF3B3-205ENST00000564899 TRIM55Q9BYV6 548 aa10.71□□□□□ -0.69
SF3B3-205ENST00000564899 GAREM1Q9H706 876 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms