RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 NSUN3Q9H649 340 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SYNDIG1Q9H7V2 258 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 SIAEQ9HAT2 523 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 BPIFA1Q9NP55 256 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FBXO8Q9NRD0 319 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 MRPL17Q9NRX2 175 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 KRT84Q9NSB2 600 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TRMT13Q9NUP7 481 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 RHBDL2Q9NX52 303 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 THUMPD1Q9NXG2 353 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 AHSPQ9NZD4 102 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 VAPAQ9P0L0 249 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 NFKBIL1Q9UBC1 381 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 VPS29Q9UBQ0 182 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 VPS51Q9UID3 782 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 FAM32AQ9Y421 112 aaKnown RBP7.43□□□□□ -1.22
ATXN3-249ENST00000564606 PTGDR2Q9Y5Y4 395 aa7.43□□□□□ -1.22
ATXN3-249ENST00000564606 TRBV5-3A0A0A0MS03 114 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 TRAV19A0A0A6YYK7 116 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 A0A1B0GVG6 124 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 MGAT4DA6NG13 374 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 RNF223E7ERA6 249 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CLIC1O00299 241 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 UPK1AO00322 258 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 PLOD2O00469 737 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 FPGTO14772 594 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 DFNA5O60443 496 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 FAM20BO75063 409 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CNOT3O75175 753 aaKnown RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ABLIM3O94929 683 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 MED26O95402 600 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 KRT75O95678 551 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF682O95780 498 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 UGT2B4P06133 528 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 COX7A2P14406 83 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ATP1B2P14415 290 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CD1EP15812 388 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 GPX2P18283 190 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 NELFEP18615 380 aaKnown RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 LAG3P18627 525 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ATF6P18850 670 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 PRDX3P30048 256 aaKnown RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SERPINB1P30740 379 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 KDELR2P33947 212 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 OR1D2P34982 312 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 HALP42357 657 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CLK1P49759 484 aaKnown RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 PGFP49763 221 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 BCAP31P51572 246 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 DGKQP52824 942 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ITGA1P56199 1179 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ISL1P61371 349 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF45Q02386 682 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SP3Q02447 781 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 GTF2H3Q13889 308 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 RAB33AQ14088 237 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 MBTPS1Q14703 1052 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 PTPRCAPQ14761 206 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF284Q2VY69 593 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 PGS1Q32NB8 556 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 TBC1D25Q3MII6 688 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SYTL3Q4VX76 610 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SYT6Q5T7P8 510 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 GALNT18Q6P9A2 607 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SCIMPQ6UWF3 145 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 UNC5DQ6UXZ4 953 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 USP43Q70EL4 1123 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 HTR3DQ70Z44 454 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CBLL1Q75N03 491 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 DET1Q7L5Y6 550 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CAMKMTQ7Z624 323 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SLCO6A1Q86UG4 719 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 RTN4RL1Q86UN2 441 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 KLHDC8AQ8IYD2 350 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 TCEAL8Q8IYN2 117 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CPA6Q8N4T0 437 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 LINC00471Q8N535 108 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 C11orf65Q8NCR3 313 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 BPIFB6Q8NFQ5 453 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 OR9Q1Q8NGQ5 310 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 RAET1EQ8TD07 263 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 RNF166Q96A37 237 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 EFHD2Q96C19 240 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-249ENST00000564606 EXOC2Q96KP1 924 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 TEX37Q96LM6 180 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 Q96MT0 163 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ZNF558Q96NG5 402 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 DACH2Q96NX9 599 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 ZSCAN5AQ9BUG6 496 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 EFCAB11Q9BUY7 163 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 HERC2P3Q9BVR0 1158 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 FUNDC2Q9BWH2 189 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 DUSP21Q9H596 190 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 SP140LQ9H930 580 aa7.42□□□□□ -1.22
ATXN3-249ENST00000564606 CPNE5Q9HCH3 593 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms