RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 LRRC4CQ9HCJ2 640 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 ZNF304Q9HCX3 659 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CDC23Q9UJX2 597 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 CDC14AQ9UNH5 594 aa14.35□□□□□ -0.11
SPG7-210ENST00000564409 HIVEP3Q5T1R4 2406 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 SPTAN1Q13813 2472 aaKnown RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 GOLGA8KD6RF30 607 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 GOLGA8TH3BQL2 631 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 EIF3FO00303 357 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 TXNDC9O14530 226 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 PCDH17O14917 1159 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 PRPF4O43172 522 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPG7-210ENST00000564409 AVILO75366 819 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 USP1O94782 785 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 AGFG2O95081 481 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 ENO3P13929 434 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 RPA3P35244 121 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 OCA2Q04671 838 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 THOC5Q13769 683 aaKnown RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 TRIP13Q15645 432 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 KLHL38Q2WGJ6 581 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 CCSMST1Q4G0I0 132 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 COX15Q7KZN9 410 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 GABPB2Q8TAK5 448 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 GRK7Q8WTQ7 553 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 KCNJ9Q92806 393 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 DPH7Q9BTV6 452 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 MRPS30Q9NP92 439 aaKnown RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 ZNF282Q9UDV7 671 aaPredicted RBP14.34□□□□□ -0.11
SPG7-210ENST00000564409 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
SPG7-210ENST00000564409 SPENQ96T58 3664 aaKnown RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 CTAGE9A4FU28 777 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ARHGEF33A8MVX0 844 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 SOCS6O14544 535 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 MPC1LP0DKB6 136 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 MCM3P25205 808 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ITGA3P26006 1051 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 PSMB5P28074 263 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 COILP38432 576 aaPredicted RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 VPS41P49754 854 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 CLCN7P51798 805 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ABATP80404 500 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 RAPSNQ13702 412 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 RBBP7Q16576 425 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 PRTGQ2VWP7 1150 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 TUBB8Q3ZCM7 444 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 PLEKHN1Q494U1 663 aaPredicted RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 ACSBG2Q5FVE4 666 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 AGAP7PQ5VUJ5 663 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 GARNL3Q5VVW2 1013 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 LRRC8EQ6NSJ5 796 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 CCDC137Q6PK04 289 aaKnown RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 Q6ZS92 163 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 AGAP4Q96P64 663 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 EBNA1BP2Q99848 306 aaKnown RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 PLCD4Q9BRC7 762 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ILKAPQ9H0C8 392 aaPredicted RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 SLC6A20Q9NP91 592 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 ZC3H7BQ9UGR2 993 aaKnown RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 RUVBL2Q9Y230 463 aaKnown RBP14.33□□□□□ -0.12
SPG7-210ENST00000564409 HS3ST3B1Q9Y662 390 aa14.33□□□□□ -0.12
SPG7-210ENST00000564409 PRRC2CQ9Y520 2896 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 RELNP78509 3460 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 IGLV3-12A0A075B6K2 115 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 LOC105369274A0A096LPK9 316 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 LOC102723532A0A0G2JNH3 316 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 A0A0J9YVX5 310 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 GFYI3L273 518 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 PGRMC1O00264 195 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 ZBTB14O43829 449 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 DDAH2O95865 285 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 EZRP15311 586 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 HRH2P25021 359 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 MAGEA3P43357 314 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 OR1D4P47884 311 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 PNLIPRP1P54315 467 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 PRDX1Q06830 199 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 FRMPD2BQ6IN97 320 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 FBXO42Q6P3S6 717 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 TTC27Q6P3X3 843 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 KIRREL2Q6UWL6 708 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 IGFL2Q6UWQ7 119 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 REXO1L1PQ8IX06 675 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 OR4N4Q8N0Y3 316 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 PPP4R1Q8TF05 950 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 ASB11Q8WXH4 323 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 INPP5DQ92835 1189 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 MIEF2Q96C03 454 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 SNRNP40Q96DI7 357 aaKnown RBP14.32□□□□□ -0.12
SPG7-210ENST00000564409 SERPINB12Q96P63 405 aa14.32□□□□□ -0.12
SPG7-210ENST00000564409 LHPPQ9H008 270 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms