RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RNF44Q7L0R7 432 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 OVCH1Q7RTY7 1134 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 PRSS58Q8IYP2 241 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 OR4N4Q8N0Y3 316 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 GALNT16Q8N428 558 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.91■□□□□ 0.3
NME3-205ENST00000563854 CALML6Q8TD86 181 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 ACTRT1Q8TDG2 376 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 SMPDL3AQ92484 453 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 GPR21Q99679 349 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 ZFYVE21Q9BQ24 234 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 IARS2Q9NSE4 1012 aaKnown RBP16.91■□□□□ 0.3
NME3-205ENST00000563854 TAC3Q9UHF0 121 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 FBXO5Q9UKT4 447 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 SNX12Q9UMY4 172 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 HECTD1Q9ULT8 2610 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 CCDC88CQ9P219 2028 aa16.91■□□□□ 0.3
NME3-205ENST00000563854 MYO1CO00159 1063 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SRPX2O60687 465 aaPredicted RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 BANF1O75531 89 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SORBS2O94875 1100 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 MED26O95402 600 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 ALPPP05187 535 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 ITGA3P26006 1051 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 MAGEA3P43357 314 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 NAA25Q14CX7 972 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 NKG7Q16617 165 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 THEMIS2Q5TEJ8 643 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SLC6A19Q695T7 634 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 KCNMB4Q86W47 210 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 CPNE9Q8IYJ1 553 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 RBMXL3Q8N7X1 1067 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SIGLEC10Q96LC7 697 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 ZNF285Q96NJ3 590 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SMAD5Q99717 465 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 FAM167BQ9BTA0 163 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 DDX47Q9H0S4 455 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 FBXL4Q9UKA2 621 aa16.9■□□□□ 0.3
NME3-205ENST00000563854 SPENQ96T58 3664 aaKnown RBP16.9■□□□□ 0.3
NME3-205ENST00000563854 OR2A25A4D2G3 310 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 FITM1A5D6W6 292 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 ZNF839A8K0R7 811 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 AGPSO00116 658 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 SMAPO00193 183 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 VPS26AO75436 327 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 HAUS5O94927 633 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 SLC16A8O95907 504 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 ERGP11308 486 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 GNLYP22749 145 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 CD97P48960 835 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 MYBPC3Q14896 1274 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 RBBP7Q16576 425 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 NEK10Q6ZWH5 1172 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 PIWIL4Q7Z3Z4 852 aaKnown RBP16.89■□□□□ 0.29
NME3-205ENST00000563854 NDNQ99608 321 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 SPSB2Q99619 263 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 WDR54Q9H977 334 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 ZNF304Q9HCX3 659 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 ATP13A2Q9NQ11 1180 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 MED16Q9Y2X0 877 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 KLK4Q9Y5K2 254 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 NBASA2RRP1 2371 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 SEC16AO15027 2179 aa16.89■□□□□ 0.29
NME3-205ENST00000563854 H0YGG7 62 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 CCNDBP1O95273 360 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ALBP02768 609 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 MPC1LP0DKB6 136 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ENO3P13929 434 aaPredicted RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 PGAM1P18669 254 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 FBLP22087 321 aaKnown RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 MMP11P24347 488 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ARF3P61204 181 aaPredicted RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 DHX9Q08211 1270 aaKnown RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 CRYMQ14894 314 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ARHGAP19Q14CB8 494 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 INPP5JQ15735 1006 aaPredicted RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 ICE2Q659A1 982 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 UBE2R2Q712K3 238 aaPredicted RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 HPS6Q86YV9 775 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 LMNTD2Q8IXW0 634 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 Q8NA96 180 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 CD200R1Q8TD46 325 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ZNF480Q8WV37 535 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 INPP5DQ92835 1189 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 CAPZA3Q96KX2 299 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 PLCD4Q9BRC7 762 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 CRB3Q9BUF7 120 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 YIPF2Q9BWQ6 316 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 ANKMY1Q9P2S6 941 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 PCYOX1Q9UHG3 505 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 NXT1Q9UKK6 140 aaKnown RBP16.88■□□□□ 0.29
NME3-205ENST00000563854 DHRS7Q9Y394 339 aa16.88■□□□□ 0.29
NME3-205ENST00000563854 MAP4K5Q9Y4K4 846 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms