RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NDUFS1P28331 727 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 OPRM1P35372 400 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ITGA8P53708 1063 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ADARP55265 1226 aaKnown RBP9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 SLC6A3Q01959 620 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 CBWD6Q4V339 395 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 CBWD3Q5JTY5 395 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 CBWD5Q5RIA9 395 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 C11orf87Q6NUJ2 197 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM83HQ6ZRV2 1179 aaPredicted RBP9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 TRIM73Q86UV7 250 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 HOOK3Q86VS8 718 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 AMZ2Q86W34 360 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 UMODL1-AS1Q8N2C9 162 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 PIH1D2Q8WWB5 315 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ASB11Q8WXH4 323 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 MSI2Q96DH6 328 aaKnown RBP9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 WFIKKN1Q96NZ8 548 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 SMIM14Q96QK8 99 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 SH2D2AQ9NP31 389 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ENAMQ9NRM1 1142 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 ACTR10Q9NZ32 417 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 WNK2Q9Y3S1 2297 aa9.9□□□□□ -0.83
HDGFL3-204ENST00000563790 UBR4Q5T4S7 5183 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 NDUFS7O75251 213 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 CDK14O94921 469 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 EPPINO95925 133 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 IL18BPO95998 194 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 HEXBP07686 556 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 SLC25A16P16260 332 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 SPINT3P49223 89 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 PKP1Q13835 747 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 RGS9BPQ6ZS82 235 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 TRAPPC5Q8IUR0 188 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 FBXW8Q8N3Y1 598 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 ACVR1CQ8NER5 493 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 PSKH2Q96QS6 385 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 RCOR1Q9UKL0 485 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 COLEC10Q9Y6Z7 277 aa9.89□□□□□ -0.83
HDGFL3-204ENST00000563790 A0A0J9YYE9 177 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 FAM237AA0A1B0GTK4 181 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 FAM166BA8MTA8 275 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ACOT7O00154 380 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 CALUO43852 315 aaPredicted RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 TRBC1P01850 177 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 SNRPBP14678 240 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 PFKFB1P16118 471 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 CTSSP25774 331 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 TRHRP34981 398 aaPredicted RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 PSMC2P35998 433 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 CDKN1AP38936 164 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 GABRB2P47870 512 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 AGFG1P52594 562 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ARFIP2P53365 341 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 WNT3P56703 355 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 HILS1P60008 231 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 GPR85P60893 370 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 LSM11P83369 360 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 GRM7Q14831 915 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 KHDC1Q4VXA5 237 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ZNF704Q6ZNC4 412 aaPredicted RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 LACC1Q8IV20 430 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ADGRF3Q8IZF5 1079 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 NDUFAF2Q8N183 169 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 ZNF418Q8TF45 676 aaPredicted RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 GLYATL1Q969I3 302 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 GTPBP3Q969Y2 492 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 FAF2Q96CS3 445 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 CAPZA3Q96KX2 299 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 HS6ST2Q96MM7 605 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 CFAP57Q96MR6 1250 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 MMP25Q9NPA2 562 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 C14orf105Q9NVL8 296 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 KLHL21Q9UJP4 597 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 DNPEPQ9ULA0 475 aa9.88□□□□□ -0.83
HDGFL3-204ENST00000563790 RGSL1A5PLK6 1076 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 MTX2O75431 263 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 CLDN7O95471 211 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 MYL1P05976 194 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 TPP2P29144 1249 aaPredicted RBP9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 PRKCIP41743 596 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 CPA2P48052 419 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 ME1P48163 572 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 MAN2A2P49641 1150 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 HLCSP50747 726 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 RENBPP51606 427 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 DSCR9P59020 149 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 LGALS3BPQ08380 585 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 NFE2L1Q14494 772 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 RFTN1Q14699 578 aaPredicted RBP9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 CAMK4Q16566 473 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 FAM214AQ32MH5 1076 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 PRMT9Q6P2P2 845 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 WDR59Q6PJI9 974 aa9.87□□□□□ -0.83
HDGFL3-204ENST00000563790 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms