RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF700Q9H0M5 742 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 ZNF304Q9HCX3 659 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 LUC7LQ9NQ29 371 aaKnown RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 NLE1Q9NVX2 485 aaPredicted RBP9.84□□□□□ -0.83
SF3B3-204ENST00000563739 POLG2Q9UHN1 485 aa9.84□□□□□ -0.83
SF3B3-204ENST00000563739 IGKV1-8A0A0C4DH67 115 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 HYKKA2RU49 373 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 OR2A25A4D2G3 310 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CBFA2T2O43439 604 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ZRANB2O95218 330 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 GSTM1P09488 218 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CD9P21926 228 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 COMTP21964 271 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 FDXRP22570 491 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 DNAJA1P31689 397 aaKnown RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ARHGAP25P42331 645 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CARSP49589 748 aaKnown RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 IST1P53990 364 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 GSTM4Q03013 218 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 TCTE1Q5JU00 501 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 KAZNQ674X7 775 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 FCRLBQ6BAA4 426 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 H3F3CQ6NXT2 135 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 RIPOR1Q6ZS17 1223 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 LANCL3Q6ZV70 420 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 HOOK3Q86VS8 718 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF227Q86WZ6 799 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 BEST3Q8N1M1 668 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 RPRMLQ8N4K4 120 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CCDC110Q8TBZ0 833 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 AGAP11Q8TF27 550 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 HEXDCQ8WVB3 486 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CTNNBL1Q8WYA6 563 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ELMO1Q92556 727 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CDKN2AIPNLQ96HQ2 116 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 RBSNQ9H1K0 784 aa9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF282Q9UDV7 671 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 RPH3AQ9Y2J0 694 aaPredicted RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 R3HDM2Q9Y2K5 976 aaKnown RBP9.83□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF407Q9C0G0 2248 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 IGHV3-20A0A0C4DH32 117 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 RASGRF2O14827 1237 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 P2RX6O15547 441 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 NADKO95544 446 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 S1PR4O95977 384 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 PIM1P11309 404 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 CD99P14209 185 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 SLC26A3P40879 764 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 SMSP52788 366 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 CSE1LP55060 971 aaKnown RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TUBA3CQ13748 450 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 DSG2Q14126 1118 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 ITIH4Q14624 930 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF766Q5HY98 468 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TUBA3EQ6PEY2 450 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 BBS12Q6ZW61 710 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF534Q76KX8 674 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TGIF2LYQ8IUE0 185 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 SPNS2Q8IVW8 549 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TTC29Q8NA56 475 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 OR13J1Q8NGT2 312 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 OR2A1Q8NGT9 310 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 CPLX3Q8WVH0 158 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 KRT35Q92764 455 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 FAM118BQ9BPY3 351 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TBL1YQ9BQ87 522 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 LIME1Q9H400 295 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 RIC8BQ9NVN3 520 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 PIH1D1Q9NWS0 290 aaKnown RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 SMARCAL1Q9NZC9 954 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 TRHDEQ9UKU6 1024 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 RUVBL2Q9Y230 463 aaKnown RBP9.82□□□□□ -0.84
SF3B3-204ENST00000563739 PCDHGB6Q9Y5F9 930 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 NFS1Q9Y697 457 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 DNAJC13O75165 2243 aa9.82□□□□□ -0.84
SF3B3-204ENST00000563739 FBN1P35555 2871 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 A0A0J9YVX5 310 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 FAM221AA4D161 298 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 NKX2-6A6NCS4 301 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 MROH6A6NGR9 719 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 IQCF5A8MTL0 148 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 HACD1B0YJ81 288 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 NPIPA5E9PKD4 350 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ANXA9O76027 345 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 NEURL1O76050 574 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TOXO94900 526 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 CRTAMO95727 393 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TNNT1P13805 278 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TPH1P17752 444 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 FBLP22087 321 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 BDKRB1P46663 353 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 EMP2P54851 167 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 RBPJQ06330 500 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF33BQ06732 778 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 FOXD4Q12950 439 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms