RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CYP4F2P78329 520 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 ABATP80404 500 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 DNASE1L3Q13609 305 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 TSTA3Q13630 321 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-206ENST00000563672 CRTC2Q53ET0 693 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-206ENST00000563672 GRTP1Q5TC63 336 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 ICE2Q659A1 982 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 ZNF385CQ66K41 422 aaPredicted RBP19.46■□□□□ 0.71
CMTM3-206ENST00000563672 LCN10Q6JVE6 187 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 TLDC1Q6P9B6 456 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 PCSK4Q6UW60 755 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 MBOAT1Q6ZNC8 495 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 PPM1NQ8N819 430 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 ANKRD49Q8WVL7 239 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 STARD8Q92502 1023 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 MR1Q95460 341 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 DPH7Q9BTV6 452 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 MRPS30Q9NP92 439 aaKnown RBP19.46■□□□□ 0.71
CMTM3-206ENST00000563672 ANKMY1Q9P2S6 941 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 TAC3Q9UHF0 121 aa19.46■□□□□ 0.71
CMTM3-206ENST00000563672 MRPS18BQ9Y676 258 aaKnown RBP19.46■□□□□ 0.71
CMTM3-206ENST00000563672 SEC16AO15027 2179 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ERVH48-1M5A8F1 160 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 NKX2-8O15522 239 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ZSCAN9O15535 394 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 NRP2O60462 931 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 SRPX2O60687 465 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 CCNDBP1O95273 360 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ENO2P09104 434 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 HIST1H2AGP0C0S8 130 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 HIST1H2ADP20671 130 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 SPRP35270 261 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 AP1S2P56377 157 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 NAB1Q13506 487 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ZXDCQ2QGD7 858 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ZNF425Q6IV72 752 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 RHBDD2Q6NTF9 364 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 FBXO42Q6P3S6 717 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 AGTRAPQ6RW13 159 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 RNF44Q7L0R7 432 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 PAQR7Q86WK9 346 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 ZNF655Q8N720 491 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 HIST1H2AHQ96KK5 128 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 BBC3Q96PG8 261 aaPredicted RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 FMO2Q99518 471 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 HIST1H2AJQ99878 128 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 PLCD4Q9BRC7 762 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 H2AFJQ9BTM1 129 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 GPR87Q9BY21 358 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 TRIM54Q9BYV2 358 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 FAM117AQ9C073 453 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 CHST8Q9H2A9 424 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 CAB39LQ9H9S4 337 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 NINJ2Q9NZG7 142 aa19.45■□□□□ 0.7
CMTM3-206ENST00000563672 NOVA2Q9UNW9 492 aaKnown RBP19.45■□□□□ 0.7
CMTM3-206ENST00000563672 FAM155BO75949 473 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 RECKO95980 971 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 ITGB2P05107 769 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 SLC12A2P55011 1212 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 TBPL1P62380 186 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 MC1RQ01726 317 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 USP10Q14694 798 aaKnown RBP19.44■□□□□ 0.7
CMTM3-206ENST00000563672 PPP1R3AQ16821 1122 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 SOWAHCQ53LP3 525 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-206ENST00000563672 TCTE1Q5JU00 501 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 SBSNQ6UWP8 590 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 LSM14AQ8ND56 463 aaKnown RBP19.44■□□□□ 0.7
CMTM3-206ENST00000563672 TSPAN17Q96FV3 270 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 WBP1Q96G27 269 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 RUFY1Q96T51 708 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 DPH2Q9BQC3 489 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-206ENST00000563672 SGPP1Q9BX95 441 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 FUT8Q9BYC5 575 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 SLC7A5P2Q9GIP4 190 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 GPAMQ9HCL2 828 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 CCDC177Q9NQR7 707 aaPredicted RBP19.44■□□□□ 0.7
CMTM3-206ENST00000563672 ARL15Q9NXU5 204 aa19.44■□□□□ 0.7
CMTM3-206ENST00000563672 FITM1A5D6W6 292 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 CDC7O00311 574 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 ATXN7O15265 892 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-206ENST00000563672 KATNA1O75449 491 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 CAPN1P07384 714 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 PTPN4P29074 926 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 RELAQ04206 551 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 NAE1Q13564 534 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 EFTUD2Q15029 972 aaKnown RBP eCLIP19.43■□□□□ 0.7
CMTM3-206ENST00000563672 ZKSCAN8Q15776 578 aaPredicted RBP19.43■□□□□ 0.7
CMTM3-206ENST00000563672 PTCHD3Q3KNS1 767 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 UBAP2Q5T6F2 1119 aaKnown RBP19.43■□□□□ 0.7
CMTM3-206ENST00000563672 FRMPD2BQ6IN97 320 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 GBP5Q96PP8 586 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 SELENOSQ9BQE4 189 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 PCBD2Q9H0N5 130 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 ATG10Q9H0Y0 220 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 L2HGDHQ9H9P8 463 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 SNX7Q9UNH6 387 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 SRPK3Q9UPE1 567 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 FARSAQ9Y285 508 aaKnown RBP19.43■□□□□ 0.7
CMTM3-206ENST00000563672 ATMQ13315 3056 aa19.43■□□□□ 0.7
CMTM3-206ENST00000563672 LOC105369274A0A096LPK9 316 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms