RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 PIGKQ92643 395 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 IGSF8Q969P0 613 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 C19orf60Q96EN9 201 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 TEPSINQ96N21 525 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF583Q96ND8 569 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CLIC6Q96NY7 704 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CADM1Q9BY67 442 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 FAM192AQ9GZU8 254 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC6A15Q9H2J7 730 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 UBQLN3Q9H347 655 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ACTR8Q9H981 624 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 MKKSQ9NPJ1 570 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 EQTNQ9NQ60 294 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ETNK2Q9NVF9 386 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ARL15Q9NXU5 204 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CNOT6Q9ULM6 557 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CNTNAP1P78357 1384 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 TAF1P21675 1872 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 LTBP1Q14766 1721 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ARAP2Q8WZ64 1704 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 MYH2Q9UKX2 1941 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 A0A0G2JLL6 359 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 A0A1W2PN81 502 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 TCRBV7S3A2A0A539 114 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 F5H697 171 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 F5H6K3 240 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ABLIM1O14639 778 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SMAD9O15198 467 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 MAGEB2O15479 319 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SEMA7AO75326 666 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ACSL3O95573 720 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 MT-CYBP00156 380 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 HMBSP08397 361 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKRD34CP0C6C1 535 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CCDC172P0C7W6 258 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 FCGR2AP12318 317 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF37AP17032 561 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ACAT1P24752 427 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 GNA11P29992 359 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC6A6P31641 620 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 GABRA5P31644 462 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 OTX2P32243 289 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SHMT1P34896 483 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CHRNA7P36544 502 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SCNN1GP51170 649 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PLCD1P51178 756 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 POLR2LP62875 67 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SIRPAP78324 504 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SP3Q02447 781 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 GABPAQ06546 454 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 KLRC3Q07444 240 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SPOCK1Q08629 439 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 HSPA14Q0VDF9 509 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 BNIP1Q12981 228 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 RFTN1Q14699 578 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SYT16Q17RD7 645 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ARL13AQ5H913 290 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 LRRC73Q5JTD7 316 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CST9Q5W186 159 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SLFN13Q68D06 897 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 DLEU7Q6UYE1 221 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PACS1Q6VY07 963 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ERASQ7Z444 233 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SPATA24Q86W54 205 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC43A2Q8N370 569 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 FADS6Q8N9I5 356 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ZFP28Q8NHY6 868 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CACTINQ8WUQ7 758 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 UBLCP1Q8WVY7 318 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SOCS4Q8WXH5 440 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CAVIN3Q969G5 261 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ORAI1Q96D31 301 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PGM2Q96G03 612 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 NAF1Q96HR8 494 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 C12orf42Q96LP6 360 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 LRFN5Q96NI6 719 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 DCLRE1CQ96SD1 692 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PCDHB18PQ96TA0 734 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 FN3KQ9H479 309 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 TRPC7Q9HCX4 862 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 AGPAT3Q9NRZ7 376 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 AGPAT5Q9NUQ2 364 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM51Q9NW97 253 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 SLCO1C1Q9NYB5 712 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 GPR132Q9UNW8 380 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 DHDHQ9UQ10 334 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ENTPD4Q9Y227 616 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 MRPS7Q9Y2R9 242 aaKnown RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 CEPT1Q9Y6K0 416 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PSME4Q14997 1843 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 PAPPA2Q9BXP8 1791 aa5.03□□□□□ -1.6
VPS35P1-201ENST00000563400 A0A0D9SFI3 127 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 E7EWF7 191 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms