RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	RIC8B	Q9NVN3	520 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	NLE1	Q9NVX2	485 aa	Predicted RBP	7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	IRAK4	Q9NWZ3	460 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	DDX56	Q9NY93	547 aa	Known RBP	7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	CHMP5	Q9NZZ3	219 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	RSPH14	Q9UHP6	348 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	SH3BGRL2	Q9UJC5	107 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	MKL2	Q9ULH7	1088 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	PLAGL1	Q9UM63	463 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	MAU2	Q9Y6X3	613 aa		7.91	□□□□□ -1.14
CKLF-208	ENST00000563092	IDS	B3KWA1	339 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092		E9PLN8	166 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	KDM1A	O60341	852 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	GPC4	O75487	556 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	F10	P00742	488 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	MYBL2	P10244	700 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ITGAM	P11215	1152 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ESRRA	P11474	423 aa	Predicted RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ICAM2	P13598	275 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	SLC26A3	P40879	764 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	GRIA3	P42263	894 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ART1	P52961	327 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	AP2B1	P63010	937 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	OCA2	Q04671	838 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ITIH4	Q14624	930 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	NFKBIB	Q15653	356 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	PRTG	Q2VWP7	1150 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FAAH2	Q6GMR7	532 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FRMPD2B	Q6IN97	320 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	CNST	Q6PJW8	725 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	MEX3B	Q6ZN04	569 aa	Known RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	RNF44	Q7L0R7	432 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FGD2	Q7Z6J4	655 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	DOLPP1	Q86YN1	238 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	TMTC1	Q8IUR5	882 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	SLC22A15	Q8IZD6	547 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	METTL27	Q8N6F8	245 aa	Predicted RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	AMER2	Q8N7J2	671 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	AMER3	Q8N944	861 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	MDS2	Q8NDY4	140 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	OR2L8	Q8NGY9	312 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	HMGCLL1	Q8TB92	370 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	CPLX3	Q8WVH0	158 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	P3H4	Q92791	437 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	IQCD	Q96DY2	449 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	MVB12A	Q96EY5	273 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	SCMH1	Q96GD3	660 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	CDKN2AIPNL	Q96HQ2	116 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	DNAJC1	Q96KC8	554 aa	Known RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FRMD6	Q96NE9	622 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FOXC2	Q99958	501 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	VKORC1	Q9BQB6	163 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	APOL2	Q9BQE5	337 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	TRIM51	Q9BSJ1	452 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	INTS7	Q9NVH2	962 aa	Known RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	C14orf105	Q9NVL8	296 aa		7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	FEZ2	Q9UHY8	353 aa	Predicted RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	TDRKH	Q9Y2W6	561 aa	Known RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	AAR2	Q9Y312	384 aa	Known RBP	7.9	□□□□□ -1.14
CKLF-208	ENST00000563092	ACAN	P16112	2415 aa		7.9	□□□□□ -1.15
CKLF-208	ENST00000563092	hCG_1818297	A0A087WSY0	165 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	LOC105369274	A0A096LPK9	316 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	LOC102723532	A0A0G2JNH3	316 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	RASGRF2	O14827	1237 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	FTH1	P02794	183 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	GYPC	P04921	128 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	DNAJA1	P31689	397 aa	Known RBP	7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	SLC1A1	P43005	524 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	EMP2	P54851	167 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	VSX2	P58304	361 aa	Predicted RBP	7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	TYRO3	Q06418	890 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	TFDP3	Q5H9I0	405 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	ZNF766	Q5HY98	468 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	ABHD17B	Q5VST6	288 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	KCTD11	Q693B1	232 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	TGIF2LY	Q8IUE0	185 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	VRK3	Q8IV63	474 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	OR4N4	Q8N0Y3	316 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	SUN3	Q8TAQ9	357 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	AGAP11	Q8TF27	550 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	ELMO1	Q92556	727 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	MAGED4	Q96JG8	741 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	NAT10	Q9H0A0	1025 aa	Known RBP	7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	SYNPO2L	Q9H987	977 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	STMN3	Q9NZ72	180 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	ASB1	Q9Y576	335 aa		7.89	□□□□□ -1.15
CKLF-208	ENST00000563092	NSD1	Q96L73	2696 aa	Predicted RBP	7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	VPS13C	Q709C8	3753 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092		A0A1W2PPV9	198 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	OR2A25	A4D2G3	310 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	MROH6	A6NGR9	719 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	SMTNL1	A8MU46	457 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	ASNA1	O43681	348 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	NRP2	O60462	931 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	SLCO2B1	O94956	709 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	CYC1	P08574	325 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	FBL	P22087	321 aa	Known RBP	7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	CXCR2	P25025	360 aa		7.88	□□□□□ -1.15
CKLF-208	ENST00000563092	PSMB4	P28070	264 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms