RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 BAG1Q99933 345 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-202ENST00000562722 MESP1Q9BRJ9 268 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 DESI2Q9BSY9 194 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 ACAT2Q9BWD1 397 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 FRMD8P1Q9BZ68 369 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-202ENST00000562722 PTGFRNQ9P2B2 879 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 LOC105369274A0A096LPK9 316 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 DYTNA2CJ06 578 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 NRP2O60462 931 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 VPS26AO75436 327 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 USP1O94782 785 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 KLHL18O94889 574 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 CXCR2P25025 360 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 CMPK1P30085 196 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 CRADDP78560 199 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 EEF1A2Q05639 463 aaKnown RBP12.39□□□□□ -0.43
SF3B3-202ENST00000562722 NAA25Q14CX7 972 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 OASLQ15646 514 aaKnown RBP12.39□□□□□ -0.43
SF3B3-202ENST00000562722 ZRSR2Q15696 482 aaKnown RBP12.39□□□□□ -0.43
SF3B3-202ENST00000562722 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 VWA2Q5GFL6 755 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 FJX1Q86VR8 437 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 OR4N4Q8N0Y3 316 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 SLC34A3Q8N130 599 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 MPP5Q8N3R9 675 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 LMF1Q96S06 567 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 ZFYVE21Q9BQ24 234 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 DPH7Q9BTV6 452 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 PLA2G3Q9NZ20 509 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 PAK5Q9P286 719 aa12.39□□□□□ -0.43
SF3B3-202ENST00000562722 PCM1Q15154 2024 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 SNRNP200O75643 2136 aaKnown RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 CREBBPQ92793 2442 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 A0A0U1RQJ8 604 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 A0A1B0GUH1 482 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 PRSS44E7EML9 344 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 FFAR3O14843 346 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 GPR42O15529 346 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 PRPF4O43172 522 aaKnown RBP eCLIP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 HNRNPRO43390 633 aaKnown RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 PRICKLE3O43900 615 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 JRKO75564 520 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 MED26O95402 600 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 ANXA5P08758 320 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 TNFRSF8P28908 595 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 FMO4P31512 558 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 EMP2P54851 167 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 FAAH2Q6GMR7 532 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 RNF44Q7L0R7 432 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 NDUFAF7Q7L592 441 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 SDCCAG8Q86SQ7 713 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 SLC13A5Q86YT5 568 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 SIRT6Q8N6T7 355 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 FAM136AQ96C01 138 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.38□□□□□ -0.43
SF3B3-202ENST00000562722 P2RY12Q9H244 342 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 SPATA7Q9P0W8 599 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 TRPC4Q9UBN4 977 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 CDC14AQ9UNH5 594 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
SF3B3-202ENST00000562722 CACNA1DQ01668 2161 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 TRAV17A0A0B4J275 112 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 PFDN6O15212 129 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 WFS1O76024 890 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 F10P00742 488 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 HEXBP07686 556 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 ZSCAN5DPP0CG00 497 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 PRR35P0CG20 571 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 COX6A1P12074 109 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.434e-7■■□□□ 13.8
SF3B3-202ENST00000562722 NMBRP28336 390 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 KCNK10P57789 538 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 FASTKQ14296 549 aaKnown RBP12.37□□□□□ -0.43
SF3B3-202ENST00000562722 MRNIPQ6NTE8 343 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 GSTA5Q7RTV2 222 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 CSNK1A1LQ8N752 337 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 OR2A1Q8NGT9 310 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 HMGCLL1Q8TB92 370 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-202ENST00000562722 MMABQ96EY8 250 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-202ENST00000562722 C10orf90Q96M02 699 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 SLX1AQ9BQ83 275 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 MRPS30Q9NP92 439 aaKnown RBP12.37□□□□□ -0.43
SF3B3-202ENST00000562722 ENAMQ9NRM1 1142 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 ABCF3Q9NUQ8 709 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 BFARQ9NZS9 450 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 COPG2Q9UBF2 871 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 ENTPD4Q9Y227 616 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 KLK4Q9Y5K2 254 aa12.37□□□□□ -0.43
SF3B3-202ENST00000562722 A0A1W2PPV9 198 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms