RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PTBP2Q9UKA9 531 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 AK5Q9Y6K8 562 aa9.27□□□□□ -0.93
RABGGTA-221ENST00000561055 FREM2Q5SZK8 3169 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SCN3AQ9NY46 2000 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 IGKV1-8A0A0C4DH67 115 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 OR2A25A4D2G3 310 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PABPN1LA6NDY0 278 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 H3BMH7 237 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 POLR1CO15160 346 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 KLK8O60259 260 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 KERAO60938 352 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 GSTA1P08263 222 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 MTHFD2P13995 350 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PVRP15151 417 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 FOLR1P15328 257 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TFEBP19484 476 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 MAGP20916 626 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PSMB5P28074 263 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC5A2P31639 672 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 GMPRP36959 345 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC6A12P48065 614 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TBPL1P62380 186 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SH3BP2P78314 561 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 IRF9Q00978 393 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 NAE1Q13564 534 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 ZC3H12BQ5HYM0 836 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 DCAF12Q5T6F0 453 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SULT1C3Q6IMI6 304 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 CAPN13Q6MZZ7 669 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 METTL2BQ6P1Q9 378 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 KLC3Q6P597 504 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 MBOAT1Q6ZNC8 495 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 CDHR3Q6ZTQ4 885 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TRIM73Q86UV7 250 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 FAM129CQ86XR2 697 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 IQCKQ8N0W5 287 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PLD6Q8N2A8 252 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM151AQ8N4L1 468 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 ABHD11Q8NFV4 315 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SNIP1Q8TAD8 396 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 USP7Q93009 1102 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF285Q96NJ3 590 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 OR6C1Q96RD1 312 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 HAUS8Q9BT25 410 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 DPH7Q9BTV6 452 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SARGQ9BW04 601 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 ATG10Q9H0Y0 220 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 VPS11Q9H270 941 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 CCDC86Q9H6F5 360 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 FAM60AQ9NP50 221 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 CCDC177Q9NQR7 707 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 THSD1Q9NS62 852 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 UTP6Q9NYH9 597 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TAC3Q9UHF0 121 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 LGALS13Q9UHV8 139 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 PILRAQ9UKJ1 303 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 SNX7Q9UNH6 387 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM184BQ9Y519 407 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 B3GALT1Q9Y5Z6 326 aa9.26□□□□□ -0.93
RABGGTA-221ENST00000561055 USP24Q9UPU5 2620 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SYCE1LA8MT33 242 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MAP2K7O14733 419 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TAPBPO15533 448 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SRPX2O60687 465 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PRAMEF10O60809 474 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 ERLIN1O75477 346 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 IPO13O94829 963 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 GUCA1CO95843 209 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 RBP1P09455 135 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 C1QTNF9P0C862 333 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 EBLN1P0CF75 366 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 ARL4DP49703 201 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MAPK10P53779 464 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 YBX1P67809 324 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PCDH1Q08174 1060 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TUBB3Q13509 450 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 E2F2Q14209 437 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MAP7Q14244 749 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 KCNAB1Q14722 419 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PTCHD3Q3KNS1 767 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TECRLQ5HYJ1 363 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 BEND6Q5SZJ8 279 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PRAMEF13Q5VWM6 474 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 FBXO42Q6P3S6 717 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 FRA10AC1Q70Z53 315 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 RNF44Q7L0R7 432 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TAX1BP1Q86VP1 789 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PAQR7Q86WK9 346 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PPP1R3BQ86XI6 285 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 DTX1Q86Y01 620 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 FAM20CQ8IXL6 584 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 OR4K1Q8NGD4 311 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MDM1Q8TC05 714 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 EPS8L3Q8TE67 593 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 UBTD2Q8WUN7 234 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms