RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MEN1O00255 615 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 CDC7O00311 574 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 OR2B3O76000 313 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 CAPN1P07384 714 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 CMPK1P30085 196 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 RPA3P35244 121 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 SPRP35270 261 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 ICE2Q659A1 982 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 FAM199XQ6PEV8 388 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 AGTRAPQ6RW13 159 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 PCSK4Q6UW60 755 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 RNF44Q7L0R7 432 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 PAQR7Q86WK9 346 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 DSELQ8IZU8 1212 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 CT55Q8WUE5 264 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 TTC9Q92623 222 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 RUFY1Q96T51 708 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 PLCD4Q9BRC7 762 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 SGPP1Q9BX95 441 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 TSPYL1Q9H0U9 437 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 ACTR5Q9H9F9 607 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 GPN2Q9H9Y4 310 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 GPAMQ9HCL2 828 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 NOVA2Q9UNW9 492 aaKnown RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 PCDHGA6Q9Y5G7 932 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 MRPS18BQ9Y676 258 aaKnown RBP14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 ATMQ13315 3056 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 ATRXP46100 2492 aa14.65□□□□□ -0.06
SNRPA1-213ENST00000560856 PHGDHO43175 533 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CCNYL3P0C7X3 344 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 DLSTP36957 453 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 GMPRP36959 345 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CSRP3P50461 194 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 AP1S2P56377 157 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CYP4F2P78329 520 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 NAE1Q13564 534 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 DNASE1L3Q13609 305 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 USP10Q14694 798 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 ZC3H12BQ5HYM0 836 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 RHBDD2Q6NTF9 364 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 TLDC1Q6P9B6 456 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CEP128Q6ZU80 1094 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 GPR135Q8IZ08 494 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 FBXL8Q96CD0 374 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 UBXN10Q96LJ8 280 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 DERL2Q9GZP9 239 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 ATG10Q9H0Y0 220 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CHST8Q9H2A9 424 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 ACSS3Q9H6R3 686 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 MRPS30Q9NP92 439 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 CUEDC1Q9NWM3 386 aaPredicted RBP14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 TXNDC16Q9P2K2 825 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 ANKMY1Q9P2S6 941 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 NFU1Q9UMS0 254 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 SH2B3Q9UQQ2 575 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 AP1M2Q9Y6Q5 423 aa14.64□□□□□ -0.07
SNRPA1-213ENST00000560856 LOC105369274A0A096LPK9 316 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 LOC102723532A0A0G2JNH3 316 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 NKX2-8O15522 239 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 ZSCAN9O15535 394 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 ENO2P09104 434 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 RHOXF2BP0C7M4 288 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 TCN2P20062 427 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 TBPL1P62380 186 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 ABATP80404 500 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 RELAQ04206 551 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 TSTA3Q13630 321 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 COL9A2Q14055 689 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 CRTC2Q53ET0 693 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 FRMPD2BQ6IN97 320 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 FAM198BQ6UWH4 519 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 OR4N4Q8N0Y3 316 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 ZNF655Q8N720 491 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 OR56A3Q8NH54 315 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 N4BP2L2Q92802 583 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 KIAA1143Q96AT1 154 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 TSPAN17Q96FV3 270 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 BBC3Q96PG8 261 aaPredicted RBP14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 GBP5Q96PP8 586 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 CYTH2Q99418 400 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 RHOXF2Q9BQY4 288 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 EFHD1Q9BUP0 239 aa14.63□□□□□ -0.07
SNRPA1-213ENST00000560856 A0A0J9YVX5 310 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 FITM1A5D6W6 292 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 NPEPPSL1A6NEC2 478 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ZNF891A8MT65 544 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 C21orf140B9A014 251 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 SRPX2O60687 465 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 CCNDBP1O95273 360 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ACSL3O95573 720 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 HBQ1P09105 142 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 HIST1H2AGP0C0S8 130 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 NPPBP16860 134 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 STMN1P16949 149 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 HIST1H2ADP20671 130 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 ITGAXP20702 1163 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 SLC12A2P55011 1212 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 RAB10P61026 200 aa14.62□□□□□ -0.07
SNRPA1-213ENST00000560856 CDKL1Q00532 357 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms