RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 VEGFDO43915 354 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 GDF9O60383 454 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 DFNA5O60443 496 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 RFPL2O75678 378 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 MTHFD1P11586 935 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 SDC1P18827 310 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 CALRP27797 417 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 GSTT1P30711 240 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 RPL3P39023 403 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 ETV3P41162 512 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 HALP42357 657 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 KIR3DL1P43629 444 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ALDH3A2P51648 485 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 MTPNP58546 118 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ADARB1P78563 741 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 TMEM115Q12893 351 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 DAG1Q14118 895 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 HNRNPA1L2Q32P51 320 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 RFX4Q33E94 735 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 TMEM52BQ4KMG9 183 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ZNF658BQ4V348 819 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 SPIN4Q56A73 249 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 FAM219BQ5XKK7 198 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 NOXRED1Q6NXP6 359 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 NEK5Q6P3R8 708 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ABRAXAS1Q6UWZ7 409 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 RFLNAQ6ZTI6 216 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 USP51Q70EK9 711 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 PARS2Q7L3T8 475 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 SERPINA11Q86U17 422 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 THOC6Q86W42 341 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 ADHFE1Q8IWW8 467 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 CPA6Q8N4T0 437 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 OR8J2Q8NGG1 315 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 WDR20Q8TBZ3 569 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 SKA2Q8WVK7 121 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 ZNF707Q96C28 371 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 AP2M1Q96CW1 435 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 FAM120BQ96EK7 910 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 RNF145Q96MT1 663 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 EFCAB11Q9BUY7 163 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 THUMPD3Q9BV44 507 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 RBM38Q9H0Z9 239 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 ZFP14Q9HCL3 533 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ITM2CQ9NQX7 267 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 DCAF13Q9NV06 445 aaKnown RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 STOX2Q9P2F5 926 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 VPS29Q9UBQ0 182 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 OAZ3Q9UMX2 235 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 GPR34Q9UPC5 381 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 INVSQ9Y283 1065 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 WNT6Q9Y6F9 365 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 CXCR6O00574 342 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 EI24O14681 340 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 AREL1O15033 823 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DPM1O60762 260 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 CCNDBP1O95273 360 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 CTSLP07711 333 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 NCK1P16333 377 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 EPCAMP16422 314 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 CEBPBP17676 345 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 RXRGP48443 463 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 GZMMP51124 257 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ARSFP54793 590 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ESRRGP62508 458 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 RPA4Q13156 261 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 LSAMPQ13449 338 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 GTF2H3Q13889 308 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 SELPLGQ14242 412 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ELAVL3Q14576 367 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 PDGFRLQ15198 375 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 DUOXA1Q1HG43 343 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ZXDCQ2QGD7 858 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 NADK2Q4G0N4 442 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ZC3H12BQ5HYM0 836 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 HABP4Q5JVS0 413 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 ANXA8L1Q5VT79 327 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 TTC23Q5W5X9 447 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 CWF19L1Q69YN2 538 aaKnown RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 GALNT18Q6P9A2 607 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 IYDQ6PHW0 289 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 AGTRAPQ6RW13 159 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 SERPINA13PQ6UXR4 307 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 UNC5DQ6UXZ4 953 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 B3GNT6Q6ZMB0 384 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 MBOAT1Q6ZNC8 495 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 GRASPQ7Z6J2 395 aaPredicted RBP9.41□□□□□ -0.9
RTF1-206ENST00000560447 VRK3Q8IV63 474 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 MSRB3Q8IXL7 192 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 TRIML2Q8N7C3 387 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 RASGEF1AQ8N9B8 481 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 FAM47BQ8NA70 645 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 VPS37AQ8NEZ2 397 aa9.41□□□□□ -0.9
RTF1-206ENST00000560447 SETD7Q8WTS6 366 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms