RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TRIB2Q92519 343 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 DNASE1L2Q92874 299 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 KIAA1143Q96AT1 154 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MIB2Q96AX9 1013 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PHF21AQ96BD5 680 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC7A6OSQ96CW6 309 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TCTN2Q96GX1 697 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OXNAD1Q96HP4 312 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PBKQ96KB5 322 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SENP8Q96LD8 212 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 C9orf72Q96LT7 481 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 FCRL3Q96P31 734 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC37BQ96QE4 947 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 BPIFA3Q9BQP9 254 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GON7Q9BXV9 100 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PANK2Q9BZ23 570 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2B2Q9GZK3 357 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 VCXQ9H320 206 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR51B6Q9H340 312 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SMOC2Q9H3U7 446 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 POFUT1Q9H488 388 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PIGUQ9H490 435 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GOLPH3Q9H4A6 298 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 C11orf49Q9H6J7 331 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SMURF2Q9HAU4 748 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RNPEPL1Q9HAU8 725 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 FOLH1BQ9HBA9 442 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MRPL47Q9HD33 250 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC39A2Q9NP94 309 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MYOZ1Q9NP98 299 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 CTPS2Q9NRF8 586 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PCDHB16Q9NRJ7 776 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF275Q9NSD4 429 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SAMSN1Q9NSI8 373 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM248Q9NWD8 314 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 OSER1Q9NX31 292 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GTSE1Q9NYZ3 720 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 GDE1Q9NZC3 331 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SH3BP4Q9P0V3 963 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 HCN3Q9P1Z3 774 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 STOX2Q9P2F5 926 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ARHGAP20Q9P2F6 1191 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 UVRAGQ9P2Y5 699 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 DKK4Q9UBT3 224 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC25A10Q9UBX3 287 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 SERGEFQ9UGK8 458 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ENPP5Q9UJA9 477 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 STOML2Q9UJZ1 356 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 NOCTQ9UK39 431 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 VPS4AQ9UN37 437 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ADAMTS5Q9UNA0 930 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ERVW-1Q9UQF0 538 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RNF24Q9Y225 148 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 AAR2Q9Y312 384 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 FKBP7Q9Y680 259 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZMYM3Q14202 1370 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 TNRQ92752 1358 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 ERBINQ96RT1 1412 aa4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 RRBP1Q9P2E9 1410 aaKnown RBP4.38□□□□□ -1.71
HMGB3P26-201ENST00000560051 MRC2Q9UBG0 1479 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCDC187A0A096LP49 1063 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 TRAV25A0A0B4J276 109 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD8B2A6NJW9 211 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 A6NL46 340 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 NPIPA7E9PJI5 369 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 SCDO00767 359 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF264O43296 627 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 SUV39H1O43463 412 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 TNFSF14O43557 240 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 SCN2BO60939 215 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 GLRA3O75311 464 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 SERPINB7O75635 380 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 UNC5CO95185 931 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLEKHA8P1O95397 391 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 MATN4O95460 622 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 TOP3BO95985 862 aaKnown RBP4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 POMCP01189 267 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 FGBP02675 491 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 AHSGP02765 367 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 KLKB1P03952 638 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 GBAP04062 536 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 CALB1P05937 261 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 NPIPA8P0DM63 369 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 C8orf89P0DMQ9 161 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCNB1P14635 433 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 EGR1P18146 543 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 TNFRSF1AP19438 455 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF10P21506 573 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 F8A1P23610 371 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 UCP1P25874 307 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 ICAM3P32942 547 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 PHBP35232 272 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRKCIP41743 596 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC6A11P48066 632 aa4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 HOXA1P49639 335 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P26-201ENST00000560051 GNG10P50151 68 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms