RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 TRPM4Q8TD43 1214 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 FAM151AQ8WW52 585 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 NDRG1Q92597 394 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 FAM120BQ96EK7 910 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 GIMAP5Q96F15 307 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 MGLLQ99685 303 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 MYOCQ99972 504 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 CNPPD1Q9BV87 410 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 PPIL3Q9H2H8 161 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 ACTL8Q9H568 366 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 IKZF5Q9H5V7 419 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 CATSPERBQ9H7T0 1116 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 QTRT2Q9H974 415 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 AMBNQ9NP70 447 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 PIGVQ9NUD9 493 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 ING4Q9UNL4 249 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 DIMT1Q9UNQ2 313 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 SAMD4AQ9UPU9 718 aaKnown RBP6.48□□□□□ -1.37
ZEB1-217ENST00000559858 CSNK1G3Q9Y6M4 447 aa6.48□□□□□ -1.37
ZEB1-217ENST00000559858 ARPC4-TTLL3A0A0A6YYG9 625 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KLRG2A4D1S0 409 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 FABP12A6NFH5 140 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 GPX5O75715 221 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 TSPAN12O95859 305 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CCNCP24863 283 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PRDX3P30048 256 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 GGT2P36268 569 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CHRNA4P43681 627 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CRISP3P54108 245 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ST3GAL4Q11206 333 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 TP53BP2Q13625 1128 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KIAA0040Q15053 153 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 HKDC1Q2TB90 917 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PTCHD3Q3KNS1 767 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 GDPGP1Q6ZNW5 385 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 GPRIN3Q6ZVF9 776 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ATCAYQ86WG3 371 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CALHM3Q86XJ0 350 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ADGRG3Q86Y34 549 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PHC2Q8IXK0 858 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 LRRC71Q8N4P6 559 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 DUSP18Q8NEJ0 188 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 LPCAT1Q8NF37 534 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 OR10Q1Q8NGQ4 319 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 OR6P1Q8NGX9 317 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KIAA1191Q96A73 305 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KIAA1143Q96AT1 154 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZC3HAV1LQ96H79 300 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 TNIP3Q96KP6 325 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PCYT2Q99447 389 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 BARHL1Q9BZE3 327 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 MFSD1Q9H3U5 465 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 POPDC3Q9HBV1 291 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 EXOSC4Q9NPD3 245 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 GPR83Q9NYM4 423 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 FBXW11Q9UKB1 542 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 RNF112Q9ULX5 631 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ABCG2Q9UNQ0 655 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 SAMHD1Q9Y3Z3 626 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 IQCMA0A1B0GVH7 501 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PI15O43692 258 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZNF682O95780 498 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 RAF1P04049 648 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PGRP06401 933 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ICAM3P32942 547 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CLCN3P51790 818 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CYP4F2P78329 520 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZNF33BQ06732 778 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CSTF3Q12996 717 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 VEPH1Q14D04 833 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 POU4F3Q15319 338 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PYDC2Q56P42 97 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CLLU1Q5K131 121 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 TMEM81Q6P7N7 255 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KLHL17Q6TDP4 642 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KIAA1324Q6UXG2 1013 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 KDELC2Q7Z4H8 507 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 LDB1Q86U70 411 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 MSRB3Q8IXL7 192 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 UBE2J2Q8N2K1 259 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 LINC00469Q8N7U9 141 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZNF366Q8N895 744 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 PNPLA1Q8N8W4 532 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZBTB44Q8NCP5 570 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 OR7D4Q8NG98 312 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 VANGL1Q8TAA9 524 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 SH3RF2Q8TEC5 729 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 MARC2Q969Z3 335 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CELF6Q96J87 481 aaKnown RBP6.47□□□□□ -1.37
ZEB1-217ENST00000559858 FAM167AQ96KS9 214 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 ZSWIM3Q96MP5 696 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 QRFPRQ96P65 431 aa6.47□□□□□ -1.37
ZEB1-217ENST00000559858 CAMKK2Q96RR4 588 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms