RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZC3H7BQ9UGR2 993 aaKnown RBP16.86■□□□□ 0.29
SMAD3-210ENST00000559092 TRMT6Q9UJA5 497 aaKnown RBP16.86■□□□□ 0.29
SMAD3-210ENST00000559092 PTRH2Q9Y3E5 179 aaKnown RBP16.86■□□□□ 0.29
SMAD3-210ENST00000559092 PCDHGB7Q9Y5F8 929 aa16.86■□□□□ 0.29
SMAD3-210ENST00000559092 TENM4Q6N022 2769 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 DNAJB5O75953 348 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 F7P08709 466 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-210ENST00000559092 GABRB3P28472 473 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 RGS4P49798 205 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 CCL11P51671 97 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 PGDP52209 483 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 EMP3P54852 163 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 ARL4CP56559 192 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 VSX2P58304 361 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-210ENST00000559092 CBLBQ13191 982 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 HIF1AQ16665 826 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 WASHC2DQ5SRD0 308 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 FAM69BQ5VUD6 431 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 CPZQ66K79 652 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 FBXO42Q6P3S6 717 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 OVCH1Q7RTY7 1134 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 CPNE9Q8IYJ1 553 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 TEX19Q8NA77 164 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 MCOLN3Q8TDD5 553 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 ZFYVE21Q9BQ24 234 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 PLCD4Q9BRC7 762 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 SLC25A23Q9BV35 468 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 ACAT2Q9BWD1 397 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 SLC26A1Q9H2B4 701 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 WDR54Q9H977 334 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 SLC22A11Q9NSA0 550 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 CORO1CQ9ULV4 474 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-210ENST00000559092 G3BP2Q9UN86 482 aaKnown RBP16.85■□□□□ 0.29
SMAD3-210ENST00000559092 TEX264Q9Y6I9 313 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 SEC16AO15027 2179 aa16.85■□□□□ 0.29
SMAD3-210ENST00000559092 HYKKA2RU49 373 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 K7EM74 188 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 PEX12O00623 359 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 TTI1O43156 1089 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 BANF1O75531 89 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 SEC31AO94979 1220 aaKnown RBP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 C8GP07360 202 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 MCM3P25205 808 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 ELK3P41970 407 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 CARSP49589 748 aaKnown RBP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 ITGA8P53708 1063 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 TIAL1Q01085 375 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 TLE1Q04724 770 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 TEDDM1Q5T9Z0 273 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 ICE2Q659A1 982 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 PRMT9Q6P2P2 845 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 SUSD1Q6UWL2 747 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 UBE2R2Q712K3 238 aaPredicted RBP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 FER1L6-AS2Q96M78 137 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 CLMPQ9H6B4 373 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 PLAC1Q9HBJ0 212 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 PPANQ9NQ55 473 aaKnown RBP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 NXT1Q9UKK6 140 aaKnown RBP16.84■□□□□ 0.29
SMAD3-210ENST00000559092 SPTBP11277 2137 aa16.84■□□□□ 0.29
SMAD3-210ENST00000559092 LOC105369274A0A096LPK9 316 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 LOC102723532A0A0G2JNH3 316 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 A0A0J9YVX5 310 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 SLC16A5O15375 505 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 SYF2O95926 243 aaKnown RBP16.83■□□□□ 0.28
SMAD3-210ENST00000559092 ITGAXP20702 1163 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 HRH2P25021 359 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 OTX2P32243 289 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 CHAF1BQ13112 559 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 ATP1A4Q13733 1029 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 FRMPD2BQ6IN97 320 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 ZNF425Q6IV72 752 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 PIWIL4Q7Z3Z4 852 aaKnown RBP16.83■□□□□ 0.28
SMAD3-210ENST00000559092 PAQR7Q86WK9 346 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 PALM2Q8IXS6 379 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 LRRC56Q8IYG6 542 aaPredicted RBP16.83■□□□□ 0.28
SMAD3-210ENST00000559092 OR4N4Q8N0Y3 316 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 BBOF1Q8ND07 529 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 CCDC138Q96M89 665 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 NDNQ99608 321 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 EPN3Q9H201 632 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 PARVBQ9HBI1 364 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 SLC6A20Q9NP91 592 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 TAC3Q9UHF0 121 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 ZNF451Q9Y4E5 1061 aa16.83■□□□□ 0.28
SMAD3-210ENST00000559092 IGKV1-8A0A0C4DH67 115 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 FANCGO15287 622 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 TP73O15350 636 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 KLHL41O60662 606 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 CNOT3O75175 753 aaKnown RBP16.82■□□□□ 0.28
SMAD3-210ENST00000559092 UMODP07911 640 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 EZRP15311 586 aaKnown RBP16.82■□□□□ 0.28
SMAD3-210ENST00000559092 CDKN2DP55273 166 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 YBX1P67809 324 aaKnown RBP16.82■□□□□ 0.28
SMAD3-210ENST00000559092 SP140Q13342 867 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms