RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PAGE2BQ5JRK9 111 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ICE2Q659A1 982 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ATG9BQ674R7 924 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 CLEC6AQ6EIG7 209 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ARMC6Q6NXE6 501 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 TMPRSS11BQ86T26 416 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ADGRF3Q8IZF5 1079 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 MINDY1Q8N5J2 469 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 CDYL2Q8N8U2 506 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 SUMF1Q8NBK3 374 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 OR6C4Q8NGE1 309 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 METTL6Q8TCB7 284 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ZNF473Q8WTR7 871 aaKnown RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 ATOH1Q92858 354 aaPredicted RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 NEIL2Q969S2 332 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 PTCD3Q96EY7 689 aaKnown RBP16.28■□□□□ 0.2
SNX1-203ENST00000558040 NRTNQ99748 197 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 EFCAB11Q9BUY7 163 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ACAT2Q9BWD1 397 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 PELI2Q9HAT8 420 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 ZNF225Q9UK10 706 aa16.28■□□□□ 0.2
SNX1-203ENST00000558040 A0A1B0GTL3 188 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 C2orf74A8MZ97 194 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 TMEM233B4DJY2 109 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 BTN3A3O00478 584 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 PPM1DO15297 605 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 ZW10O43264 779 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 PRICKLE3O43900 615 aaPredicted RBP16.27■□□□□ 0.2
SNX1-203ENST00000558040 FKBP9O95302 570 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 KRT6AP02538 564 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 KRT6BP04259 564 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 CAPN1P07384 714 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 C1GALT1C1LP0DN25 315 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 JUPP14923 745 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 GLB1P16278 677 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 HRH2P25021 359 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 CMPK1P30085 196 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 CASP2P42575 452 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 KRT6CP48668 564 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 EPHA4P54764 986 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 PRDX1Q06830 199 aaKnown RBP16.27■□□□□ 0.2
SNX1-203ENST00000558040 LAPTM5Q13571 262 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 DOC2AQ14183 400 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 NAA25Q14CX7 972 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 NR0B2Q15466 257 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 SF1Q15637 639 aaKnown RBP16.27■□□□□ 0.2
SNX1-203ENST00000558040 GRHL2Q6ISB3 625 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 NXPE4Q6UWF7 544 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 SLCO4C1Q6ZQN7 724 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 PIGWQ7Z7B1 504 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 SLC35F3Q8IY50 421 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 DCBLD1Q8N8Z6 715 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 OR2A1Q8NGT9 310 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 OR2I1PQ8NGU4 316 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 OR10G6Q8NH81 332 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 CCT6BQ92526 530 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 WDR34Q96EX3 536 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 THOC1Q96FV9 657 aaKnown RBP16.27■□□□□ 0.2
SNX1-203ENST00000558040 CCT7Q99832 543 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 KCNH6Q9H252 994 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 TNFRSF12AQ9NP84 129 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 MRPS30Q9NP92 439 aaKnown RBP16.27■□□□□ 0.2
SNX1-203ENST00000558040 EVA1BQ9NVM1 165 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 LRIT1Q9P2V4 623 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 DCTN4Q9UJW0 460 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 SNX6Q9UNH7 406 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 RNF11Q9Y3C5 154 aa16.27■□□□□ 0.2
SNX1-203ENST00000558040 A0A0G2JND7 137 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 GSAPA4D1B5 854 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 WFS1O76024 890 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 UBXN7O94888 489 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ZNF806P0C7X5 589 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 CDH1P12830 882 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 AMD1P17707 334 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 POLR2CP19387 275 aaPredicted RBP16.26■□□□□ 0.19
SNX1-203ENST00000558040 CXCR2P25025 360 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 PSMB5P28074 263 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 GPR3P46089 330 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 CCR8P51685 355 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ARFIP2P53365 341 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 AQP5P55064 265 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 FOXA1P55317 472 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 E2F2Q14209 437 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 PDCD2Q16342 344 aaPredicted RBP16.26■□□□□ 0.19
SNX1-203ENST00000558040 HIST2H2ACQ16777 129 aaPredicted RBP16.26■□□□□ 0.19
SNX1-203ENST00000558040 HIST2H2AA3Q6FI13 130 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 TCEAL6Q6IPX3 200 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ZNF438Q7Z4V0 828 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 ZNF761Q86XN6 746 aaPredicted RBP16.26■□□□□ 0.19
SNX1-203ENST00000558040 KRT78Q8N1N4 520 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 FAM181AQ8N9Y4 354 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 OR2L3Q8NG85 312 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 RFWD2Q8NHY2 731 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 TWIST2Q8WVJ9 160 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 TCEAL3Q969E4 200 aa16.26■□□□□ 0.19
SNX1-203ENST00000558040 UBE2E3Q969T4 207 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms